RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA564013", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 3

analysis 2

tax_superkingdom 1

  • Eukaryota · 12 ✖

tax_clade 1

  • Metamonada · 12 ✖

bioproject 1

  • PRJNA564013 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3099542 3099542 PRJNA564013_P_NODE_193763_length_312_cov_3.254980_g190912_i0 PRJNA564013 193763 312 3.25498 10.1555376 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.7 0.008   NTclustered gi|2806472865|ref|XM_068508731.1| 1144522 g190912 i0 94.444 0.115384615384615 36 1 11 1 41 75 865 900 Tritrichomonas foetus uncharacterized protein (TRFO_32860), partial mRNA blastn 36 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
10754016 10754016 PRJNA564013_P_NODE_247689_length_263_cov_4.712871_g244837_i0 PRJNA564013 247689 263 4.712871 12.39485073 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 52.8 0.024   NTclustered gi|2319582776|ref|XM_001582426.2| 412133 g244837 i0 100 0.106463878326996 28 0 11 0 37 64 2010 2037 Trichomonas vaginalis G3 EF-1 beta acid 2 family (TVAGG3_0999810), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
12029968 12029968 PRJNA564013_P_NODE_309810_length_219_cov_4.158228_g306958_i0 PRJNA564013 309810 219 4.158228 9.10651932 root 1 Root_unresolved Root_unresolved 73.2 4.89e-13   NR TNJ26987.1 5742 g306958 i0 57.1 7.89041095890411 56 24 76.7 0 44 211 311 366 TNJ26987.1 Kinase, NEK [Giardia muris] diamond 1728 73.2 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
24772864 24772864 PRJNA564013_P_NODE_109980_length_395_cov_7.149701_g107139_i0 PRJNA564013 109980 395 7.149701 28.24131895 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 60.2 2.26e-4   NTclustered gi|2794950968|ref|XM_067869193.1| 2049356 g107139 i0 100 3.25316455696203 32 0 8 0 343 374 8342 8373 Monocercomonoides exilis putative Protein kinase domain (MONOS_1628), partial mRNA blastn 1285 60.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
26636004 26636004 PRJNA564013_P_NODE_211981_length_295_cov_2.213675_g209130_i0 PRJNA564013 211981 295 2.213675 6.53034125 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 67.8 1.11e-10   NR KAJ5080693.1 1746090 g209130 i0 44.3 0.986440677966102 97 53 97.6 1 289 2 127 223 KAJ5080693.1 hypothetical protein M0811_13877 [Anaeramoeba ignava] diamond 291 67.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
27332335 27332335 PRJNA564013_P_NODE_56123_length_532_cov_9.375796_g53345_i0 PRJNA564013 56123 532 9.375796 49.87923472 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 105 1.43e-22   NR KAJ5077882.1 1746090 g53345 i0 41 0.783834586466165 139 82 78.4 0 437 21 3 141 KAJ5077882.1 von willebrand factor a domain-containing protein 5a [Anaeramoeba ignava] diamond 417 105 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
27868780 27868780 PRJNA564013_P_NODE_282905_length_236_cov_9.960000_g280053_i0 PRJNA564013 282905 236 9.96 23.5056 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 43.1 0.0248   NR XP_068366790.1 1144522 g280053 i0 42.9 0.622881355932203 49 27 62.3 1 198 52 495 542 XP_068366790.1 uncharacterized protein TRFO_16222 [Tritrichomonas foetus] diamond 147 43.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30016193 30016193 PRJNA564013_P_NODE_359271_length_192_cov_3.083969_g356419_i0 PRJNA564013 359271 192 3.083969 5.92122048 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 58.5 1.97e-8   NR XP_001317232.1 412133 g356419 i0 70 0.625 40 12 62.5 0 17 136 116 155 XP_001317232.1 GTPase, Ras family, Rab subfamily [Trichomonas vaginalis G3] diamond 120 58.5 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
30693312 30693312 PRJNA564013_P_NODE_134913_length_366_cov_5.567213_g132065_i0 PRJNA564013 134913 366 5.567213 20.37599958 Oxymonadida 66288 Root_unresolved Root_unresolved 73.6 2.49e-12   NR KAJ3432654.1 1746091 g132065 i0 35.8 3.22950819672131 109 66 86.9 2 356 39 1236 1343 KAJ3432654.1 c2 calcium-dependent membrane targeting [Anaeramoeba flamelloides] diamond 1182 73.6 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
31659309 31659309 PRJNA564013_P_NODE_202517_length_304_cov_1.604938_g199666_i0 PRJNA564013 202517 304 1.604938 4.87901152 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 62.8 5.81e-9   NR KAJ6248922.1 1746091 g199666 i0 44.4 3.48355263157895 90 49 88.8 1 302 33 240 328 KAJ6248922.1 tigger transposable element-derived protein [Anaeramoeba flamelloides] diamond 1059 62.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
31849224 31849224 PRJNA564013_P_NODE_183157_length_322_cov_2.796935_g180307_i0 PRJNA564013 183157 322 2.796935 9.0061307 Streblomastix strix 222440 Preaxostyla other_Eukaryota 49.3 4.15e-4   NR KAA6372077.1 222440 g180307 i0 32.3 0.866459627329193 93 50 86.6 1 311 33 45 124 KAA6372077.1 MAG: hypothetical protein EZS28_032396, partial [Streblomastix strix] diamond 279 49.3 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
32387198 32387198 PRJNA564013_P_NODE_9079_length_1140_cov_22.165894_g7499_i0 PRJNA564013 9079 1140 22.165894 252.6911916 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 67.8 3.96e-8   NR XP_067776970.1 135588 g7499 i0 49.3 0.363157894736842 69 28 18.2 2 800 594 119 180 XP_067776970.1 DEAD/DEAH box helicase family protein [Histomonas meleagridis] diamond 414 67.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;