RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA564013", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Eiseniibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Eiseniibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA564013 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27015882 27015882 PRJNA564013_P_NODE_148502_length_353_cov_3.123288_g145653_i0 PRJNA564013 148502 353 3.123288 11.02520664 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 70.9 1.77e-11   NR HKQ57531.1 2212470 g145653 i0 53.2 1.51274787535411 62 29 52.7 0 37 222 58 119 HKQ57531.1 DUF2793 domain-containing protein [Candidatus Eiseniibacteriota bacterium] diamond 534 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
29132065 29132065 PRJNA564013_P_NODE_30229_length_691_cov_3.950794_g27662_i0 PRJNA564013 30229 691 3.950794 27.29998654 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 152 1.99e-38   NR HYV52725.1 2212470 g27662 i0 39.5 0.911722141823444 210 125 90.3 2 626 3 544 753 HYV52725.1 reverse transcriptase family protein [Candidatus Eiseniibacteriota bacterium] diamond 630 152 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;