RNAquarium Metadata Server
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contig_metadata

14 rows where bioproject = "PRJNA562549" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 14 ✖

bioproject 1

  • PRJNA562549 · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15848635 15848635 PRJNA562549_P_NODE_28413_length_221_cov_1.625000_g28180_i0 PRJNA562549 28413 221 1.625 3.59125 Zebrafish picornavirus 1 2304617 Viruses Viruses 392 1.0199999999999999e-104   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g28180 i0 98.643 2.99095022624434 221 3 100 0 1 221 7251 7471 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 661 392 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
24772030 24772030 PRJNA562549_P_NODE_31980_length_210_cov_0.872483_g31747_i0 PRJNA562549 31980 210 0.872483 1.8322143 Zebrafish jaw poxvirus RQ14 Viruses Viruses 171 4.88e-38   NTclustered gi|1998702321|dbj|LC613089.1| RQ14 g31747 i0 82.323 77.3 198 33 94 2 6 202 370821 371017 Carp edema virus FTI2020 DNA, complete genome blastn 16233 171 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
27079160 27079160 PRJNA562549_P_NODE_3202_length_627_cov_2.418728_g3061_i0 PRJNA562549 3202 627 2.418728 15.16542456 Hermetia illucens toti-like virus 1 2950741 Viruses Viruses 75.1 9.39e-12   NR DAZ89877.1 2950741 g3061 i0 29.9 0.784688995215311 164 108 77.5 4 616 131 399 557 DAZ89877.1 TPA_asm: putative RNA-dependent RNA polymerase [Hermetia illucens toti-like virus 1] diamond 492 75.1 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Hermetia illucens toti-like virus 1
27237113 27237113 PRJNA562549_P_NODE_17843_length_274_cov_1.309859_g17610_i0 PRJNA562549 17843 274 1.309859 3.58901366 Pimephales minnow adintovirus 2609864 Viruses Viruses 49.7 1.68e-4   NR DAC81404.1 2609864 g17610 i0 34.7 1.64233576642336 75 48 81 1 270 49 123 197 DAC81404.1 TPA_asm: hypothetical protein [Pimephales minnow adintovirus] diamond 450 49.7 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
28626836 28626836 PRJNA562549_P_NODE_32047_length_210_cov_0.872483_g31814_i0 PRJNA562549 32047 210 0.872483 1.8322143 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 48.9 1.63e-4   NR XCM67741.1 3003959 g31814 i0 52.4 0.6 42 20 60 0 128 3 156 197 XCM67741.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 126 48.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
28815749 28815749 PRJNA562549_P_NODE_24568_length_236_cov_2.737143_g24335_i0 PRJNA562549 24568 236 2.737143 6.45965748 Durnavirales sp. 2809355 Viruses Viruses 62.4 3.96e-9   NR WRQ64725.1 2809355 g24335 i0 48.3 1.48728813559322 60 31 76.3 0 34 213 185 244 WRQ64725.1 RNA-dependent RNA polymerase, partial [Durnavirales sp.] diamond 351 62.4 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales     Durnavirales sp.
28815770 28815770 PRJNA562549_P_NODE_33328_length_208_cov_0.884354_g33095_i0 PRJNA562549 33328 208 0.884354 1.83945632 Adintovirus bos4377 3115894 Viruses Viruses 96.3 1.07e-21   NR DBA50491.1 3115894 g33095 i0 77.9 0.980769230769231 68 15 98.1 0 3 206 116 183 DBA50491.1 MAG TPA_asm: Integrase [Adintovirus bos4377] diamond 204 96.3 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
29163636 29163636 PRJNA562549_P_NODE_35109_length_204_cov_2.118881_g34876_i0 PRJNA562549 35109 204 2.118881 4.32251724 brine shrimp yue-like virus 8 2900460 Viruses Viruses 56.2 3.92e-7   NR UNI74194.1 2900460 g34876 i0 33.8 0.955882352941177 65 43 95.6 0 201 7 236 300 UNI74194.1 MAG: hypothetical protein [brine shrimp yue-like virus 8] diamond 195 56.2 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 8
29731440 29731440 PRJNA562549_P_NODE_26090_length_230_cov_1.686391_g25857_i0 PRJNA562549 26090 230 1.686391 3.8786993 Beauveria bassiana partitivirus 4 3071797 Viruses Viruses 49.7 1.11e-4   NR WMJ90931.1 3071797 g25857 i0 43.5 3.35217391304348 62 34 79.6 1 185 3 407 468 WMJ90931.1 RNA-dependent RNA polymerase [Beauveria bassiana partitivirus 4] diamond 771 49.7 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Beauveria bassiana partitivirus 4
29952740 29952740 PRJNA562549_P_NODE_20451_length_257_cov_2.750000_g20218_i0 PRJNA562549 20451 257 2.75 7.0675 Kamu toti-like virus 1 2838392 Viruses Viruses 60.8 1.84e-8   NR QVU40016.1 2838392 g20218 i0 38.6 1.93774319066148 83 50 96.9 1 1 249 311 392 QVU40016.1 hypothetical protein [Kamu toti-like virus 1] diamond 498 60.8 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Kamu toti-like virus 1
30219364 30219364 PRJNA562549_P_NODE_19552_length_263_cov_1.287129_g19319_i0 PRJNA562549 19552 263 1.287129 3.38514927 Chuvivirus 2842604 Viruses Viruses 120 5.5399999999999995e-30   NR WET19887.1 2842604 g19319 i0 65.5 1.98479087452471 87 30 99.2 0 263 3 285 371 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 522 120 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus
30851278 30851278 PRJNA562549_P_NODE_19954_length_260_cov_2.864322_g19721_i0 PRJNA562549 19954 260 2.864322 7.4472372 Viruses 10239 Viruses Viruses 69.7 1.47e-11   NR WAK77364.1 1955172 g19721 i0 42.7 1.73076923076923 75 43 86.5 0 20 244 371 445 WAK77364.1 MAG: RNA-dependent RNA polymerase, partial [Totiviridae sp.] diamond 450 70.1 0.994293865905849 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
31279792 31279792 PRJNA562549_P_NODE_36495_length_202_cov_0.921986_g36262_i0 PRJNA562549 36495 202 0.921986 1.86241172 uncultured Caudovirales phage 2100421 Viruses Viruses 79.7 2.47e-16   NR CAB4141893.1 2100421 g36262 i0 53.8 1.9009900990099 65 30 96.5 0 202 8 50 114 CAB4141893.1 gp6 domain containing protein [uncultured Caudovirales phage] diamond 384 79.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
32545493 32545493 PRJNA562549_P_NODE_10159_length_361_cov_1.236667_g9926_i0 PRJNA562549 10159 361 1.236667 4.46436787 Homavirus sp. 2487769 Viruses Viruses 109 4.31e-26   NR AYV82419.1 2487769 g9926 i0 46.2 0.864265927977839 104 56 86.4 0 361 50 223 326 AYV82419.1 MAG: elongation factor 1-alpha-like protein [Homavirus sp.] diamond 312 109 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Homavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;