RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA562549", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA562549 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29163636 29163636 PRJNA562549_P_NODE_35109_length_204_cov_2.118881_g34876_i0 PRJNA562549 35109 204 2.118881 4.32251724 brine shrimp yue-like virus 8 2900460 Viruses Viruses 56.2 3.92e-7   NR UNI74194.1 2900460 g34876 i0 33.8 0.955882352941177 65 43 95.6 0 201 7 236 300 UNI74194.1 MAG: hypothetical protein [brine shrimp yue-like virus 8] diamond 195 56.2 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 8
30219364 30219364 PRJNA562549_P_NODE_19552_length_263_cov_1.287129_g19319_i0 PRJNA562549 19552 263 1.287129 3.38514927 Chuvivirus 2842604 Viruses Viruses 120 5.5399999999999995e-30   NR WET19887.1 2842604 g19319 i0 65.5 1.98479087452471 87 30 99.2 0 263 3 285 371 WET19887.1 MAG: nucleoprotein [Freshwater turtle neural virus 1] diamond 522 120 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;