RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA562549", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA562549 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27079160 27079160 PRJNA562549_P_NODE_3202_length_627_cov_2.418728_g3061_i0 PRJNA562549 3202 627 2.418728 15.16542456 Hermetia illucens toti-like virus 1 2950741 Viruses Viruses 75.1 9.39e-12   NR DAZ89877.1 2950741 g3061 i0 29.9 0.784688995215311 164 108 77.5 4 616 131 399 557 DAZ89877.1 TPA_asm: putative RNA-dependent RNA polymerase [Hermetia illucens toti-like virus 1] diamond 492 75.1 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Hermetia illucens toti-like virus 1
29952740 29952740 PRJNA562549_P_NODE_20451_length_257_cov_2.750000_g20218_i0 PRJNA562549 20451 257 2.75 7.0675 Kamu toti-like virus 1 2838392 Viruses Viruses 60.8 1.84e-8   NR QVU40016.1 2838392 g20218 i0 38.6 1.93774319066148 83 50 96.9 1 1 249 311 392 QVU40016.1 hypothetical protein [Kamu toti-like virus 1] diamond 498 60.8 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Kamu toti-like virus 1
30851278 30851278 PRJNA562549_P_NODE_19954_length_260_cov_2.864322_g19721_i0 PRJNA562549 19954 260 2.864322 7.4472372 Viruses 10239 Viruses Viruses 69.7 1.47e-11   NR WAK77364.1 1955172 g19721 i0 42.7 1.73076923076923 75 43 86.5 0 20 244 371 445 WAK77364.1 MAG: RNA-dependent RNA polymerase, partial [Totiviridae sp.] diamond 450 70.1 0.994293865905849 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;