RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA562549" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA562549 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10750168 10750168 PRJNA562549_P_NODE_35969_length_203_cov_0.915493_g35736_i0 PRJNA562549 35969 203 0.915493 1.85845079 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 115 7.39e-28   NR XP_004341420.1 1257118 g35736 i0 76.1 7.92118226600985 67 16 99 0 2 202 124 190 XP_004341420.1 vacuolar sorting protein, putative [Acanthamoeba castellanii str. Neff] diamond 1608 115 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29889717 29889717 PRJNA562549_P_NODE_13071_length_317_cov_3.046875_g12838_i0 PRJNA562549 13071 317 3.046875 9.65859375 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.4 0.00171   NR XP_004351526.1 1257118 g12838 i0 44.9 0.463722397476341 49 27 46.4 0 56 202 26 74 XP_004351526.1 selT/selW/selH selenoprotein domain containing protein [Acanthamoeba castellanii str. Neff] diamond 147 45.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30647611 30647611 PRJNA562549_P_NODE_29293_length_218_cov_1.643312_g29060_i0 PRJNA562549 29293 218 1.643312 3.58242016 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 105 1.5999999999999999e-24   NR XP_004335439.1 1257118 g29060 i0 73.2 11.8623853211009 71 19 97.7 0 214 2 342 412 XP_004335439.1 P protein, putative [Acanthamoeba castellanii str. Neff] diamond 2586 105 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30932312 30932312 PRJNA562549_P_NODE_6814_length_442_cov_3.115486_g6581_i0 PRJNA562549 6814 442 3.115486 13.77044812 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.4 6.02e-5   NR XP_004351526.1 1257118 g6581 i0 35.6 0.495475113122172 73 47 49.5 0 411 193 26 98 XP_004351526.1 selT/selW/selH selenoprotein domain containing protein [Acanthamoeba castellanii str. Neff] diamond 219 50.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31483724 31483724 PRJNA562549_P_NODE_33236_length_208_cov_0.884354_g33003_i0 PRJNA562549 33236 208 0.884354 1.83945632 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 93.6 1.6000000000000002e-22   NR 7SOG_A 5755 g33003 i0 58.8 4.88942307692308 68 28 98.1 0 1 204 4 71 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 1017 93.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31659236 31659236 PRJNA562549_P_NODE_35337_length_204_cov_0.909091_g35104_i0 PRJNA562549 35337 204 0.909091 1.85454564 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87 5.45e-18   NR XP_004340685.1 1257118 g35104 i0 61.9 2.80882352941176 63 24 92.6 0 193 5 37 99 XP_004340685.1 histidine kinase A family protein [Acanthamoeba castellanii str. Neff] diamond 573 87 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32797060 32797060 PRJNA562549_P_NODE_35420_length_204_cov_0.909091_g35187_i0 PRJNA562549 35420 204 0.909091 1.85454564 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 92 6.6e-20   NR XP_004337281.1 1257118 g35187 i0 62.7 0.985294117647059 67 25 98.5 0 4 204 54 120 XP_004337281.1 calponin domain containing protein [Acanthamoeba castellanii str. Neff] diamond 201 92 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;