RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA562549" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA562549 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24771943 24771943 PRJNA562549_P_NODE_21720_length_250_cov_2.624339_g21487_i0 PRJNA562549 21720 250 2.624339 6.5608475 Nitrosarchaeum sp. 2026886 Archaea Archaea 115 1.28e-27   NR MFB5612793.1 2026886 g21487 i0 83.3 1.848 72 12 86.4 0 248 33 499 570 MFB5612793.1 molecular chaperone DnaK [Nitrosarchaeum sp.] diamond 462 115 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
28437299 28437299 PRJNA562549_P_NODE_29066_length_219_cov_1.367089_g28833_i0 PRJNA562549 29066 219 1.367089 2.99392491 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 45.1 7.06e-4   NR MCW3976004.1 2026714 g28833 i0 47.1 1.47945205479452 34 18 46.6 0 12 113 22 55 MCW3976004.1 2TM domain-containing protein [Candidatus Bathyarchaeota archaeon] diamond 324 45.1 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;