RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA562549", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA562549 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
545767 545767 PRJNA562549_P_NODE_34641_length_205_cov_1.763889_g34408_i0 PRJNA562549 34641 205 1.763889 3.61597245 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 75 3.82e-9   NTclustered gi|585689230|ref|XM_006820765.1| 10224 g34408 i0 88.525 0.84390243902439 61 7 30 0 77 137 1902 1842 PREDICTED: Saccoglossus kowalevskii isoleucine--tRNA ligase, cytoplasmic-like (LOC100369426), partial mRNA blastn 173 75 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
26952451 26952451 PRJNA562549_P_NODE_36242_length_202_cov_1.773050_g36009_i0 PRJNA562549 36242 202 1.77305 3.581561 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 94.7 1.08e-20   NR XP_002736376.1 10224 g36009 i0 62.1 1.9752475247524801 66 25 98 0 199 2 510 575 XP_002736376.1 PREDICTED: E3 ubiquitin-protein ligase MIB2-like, partial [Saccoglossus kowalevskii] diamond 399 94.7 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
27124298 27124298 PRJNA562549_P_NODE_25362_length_233_cov_1.511628_g25129_i0 PRJNA562549 25362 233 1.511628 3.52209324 Metazoa 33208 Hemichordata other_Eukaryota 98.2 1.18e-22   NR XP_070531626.1 63121 g25129 i0 59.7 3.9656652360515 77 27 99.1 1 231 1 152 224 XP_070531626.1 large ribosomal subunit protein uL18-like [Ptychodera flava] diamond 924 99 0.991919191919192 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
32134061 32134061 PRJNA562549_P_NODE_23198_length_243_cov_1.456044_g22965_i0 PRJNA562549 23198 243 1.456044 3.53818692 Ptychodera flava 63121 Hemichordata other_Eukaryota 87.4 5.24e-20   NR XP_070578892.1 63121 g22965 i0 57.7 0.876543209876543 71 30 87.7 0 242 30 12 82 XP_070578892.1 uncharacterized protein [Ptychodera flava] diamond 213 87.4 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;