RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA562549", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA562549 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13884588 13884588 PRJNA562549_P_NODE_12051_length_330_cov_1.970260_g11818_i0 PRJNA562549 12051 330 1.97026 6.501858 Paraphysoderma sedebokerense 1500003 Fungi Fungi 152 3.97e-44   NR KAI9145653.1 1500003 g11818 i0 68.8 1.98181818181818 109 27 99.1 1 328 2 90 191 KAI9145653.1 ribosomal protein S8e/ribosomal biogenesis NSA2 [Paraphysoderma sedebokerense] diamond 654 152 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
23498269 23498269 PRJNA562549_P_NODE_9059_length_382_cov_2.426791_g8826_i0 PRJNA562549 9059 382 2.426791 9.27034162 Blastocladiella britannica 64508 Fungi Fungi 195 1.06e-60   NR KAI9220356.1 64508 g8826 i0 75.4 6.95026178010471 126 31 99 0 382 5 75 200 KAI9220356.1 ribosomal protein L15e [Blastocladiella britannica] diamond 2655 195 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
27932010 27932010 PRJNA562549_P_NODE_33285_length_208_cov_0.884354_g33052_i0 PRJNA562549 33285 208 0.884354 1.83945632 Blastocladiella britannica 64508 Fungi Fungi 57.4 1.32e-7   NR KAI9220302.1 64508 g33052 i0 71.1 3.53365384615385 45 13 64.9 0 26 160 188 232 KAI9220302.1 hypothetical protein BC828DRAFT_383858 [Blastocladiella britannica] diamond 735 57.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
31325292 31325292 PRJNA562549_P_NODE_26415_length_229_cov_1.392857_g26182_i0 PRJNA562549 26415 229 1.392857 3.18964253 Eukaryota 2759 Fungi Fungi 79 1.19e-16   NR KAI9179438.1 1313167 g26182 i0 50 4.8471615720524 74 37 96.9 0 3 224 3 76 KAI9179438.1 60S ribosomal protein L27B [Blastocladiella emersonii ATCC 22665] diamond 1110 79.7 0.991217063989962 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
32828900 32828900 PRJNA562549_P_NODE_34900_length_205_cov_0.902778_g34667_i0 PRJNA562549 34900 205 0.902778 1.8506949 Paraphysoderma sedebokerense 1500003 Fungi Fungi 42.4 0.00817   NR KAI9136778.1 1500003 g34667 i0 46.9 0.468292682926829 32 17 46.8 0 101 6 4 35 KAI9136778.1 hypothetical protein BKA69DRAFT_1033297, partial [Paraphysoderma sedebokerense] diamond 96 42.4 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
32860221 32860221 PRJNA562549_P_NODE_26940_length_227_cov_1.445783_g26707_i0 PRJNA562549 26940 227 1.445783 3.28192741 Allomyces macrogynus ATCC 38327 578462 Fungi Fungi 75.5 4.48e-14   NR KNE60385.1 578462 g26707 i0 63.3 1.95594713656388 49 18 64.8 0 49 195 244 292 KNE60385.1 hypothetical protein AMAG_05774 [Allomyces macrogynus ATCC 38327] diamond 444 75.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces macrogynus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;