RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA562549", tax_kingdom = "Bamfordvirae" and tax_phylum = "Nucleocytoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nucleocytoviricota · 2 ✖

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA562549 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24772030 24772030 PRJNA562549_P_NODE_31980_length_210_cov_0.872483_g31747_i0 PRJNA562549 31980 210 0.872483 1.8322143 Zebrafish jaw poxvirus RQ14 Viruses Viruses 171 4.88e-38   NTclustered gi|1998702321|dbj|LC613089.1| RQ14 g31747 i0 82.323 77.3 198 33 94 2 6 202 370821 371017 Carp edema virus FTI2020 DNA, complete genome blastn 16233 171 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Zebrafish jaw poxvirus
32545493 32545493 PRJNA562549_P_NODE_10159_length_361_cov_1.236667_g9926_i0 PRJNA562549 10159 361 1.236667 4.46436787 Homavirus sp. 2487769 Viruses Viruses 109 4.31e-26   NR AYV82419.1 2487769 g9926 i0 46.2 0.864265927977839 104 56 86.4 0 361 50 223 326 AYV82419.1 MAG: elongation factor 1-alpha-like protein [Homavirus sp.] diamond 312 109 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Homavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;