RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA562549", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA562549 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31090225 31090225 PRJNA562549_P_NODE_36075_length_202_cov_7.730496_g35842_i0 PRJNA562549 36075 202 7.730496 15.61560192 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 95.9 1.86e-24   NR MES1911722.1 1215613 g35842 i0 80.8 0.772277227722772 52 10 77.2 0 191 36 1 52 MES1911722.1 hypothetical protein [Cercozoa sp. M6MM] diamond 156 95.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32007431 32007431 PRJNA562549_P_NODE_31638_length_210_cov_5.369128_g31405_i0 PRJNA562549 31638 210 5.369128 11.2751688 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 80.9 1.88e-18   NR MES1911722.1 1215613 g31405 i0 72.9 0.685714285714286 48 13 68.6 0 9 152 5 52 MES1911722.1 hypothetical protein [Cercozoa sp. M6MM] diamond 144 80.9 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32639575 32639575 PRJNA562549_P_NODE_32720_length_209_cov_0.878378_g32487_i0 PRJNA562549 32720 209 0.878378 1.83581002 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 51.6 1.74e-5   NR MES1915879.1 1215613 g32487 i0 40.3 0.961722488038278 67 40 96.2 0 7 207 175 241 MES1915879.1 hypothetical protein [Cercozoa sp. M6MM] diamond 201 51.6 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;