RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where bioproject = "PRJNA562549", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 18 ✖

tax_clade 1

  • Sar · 18 ✖

bioproject 1

  • PRJNA562549 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
545678 545678 PRJNA562549_P_NODE_20821_length_255_cov_2.515464_g20588_i0 PRJNA562549 20821 255 2.515464 6.4144332 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 147 4.099999999999999e-41   NR AZL94188.1 476202 g20588 i0 84.5 0.988235294117647 84 13 98.8 0 253 2 264 347 AZL94188.1 iron ABC transporter substrate-binding protein [Cardiosporidium cionae] diamond 252 147 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
3096571 3096571 PRJNA562549_P_NODE_12463_length_325_cov_1.462121_g12230_i0 PRJNA562549 12463 325 1.462121 4.75189325 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 128 1.04e-31   NR XP_013247079.1 5801 g12230 i0 83.6 2.01230769230769 73 12 67.4 0 76 294 810 882 XP_013247079.1 aconitate hydratase, putative [Eimeria acervulina] diamond 654 128 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
6923679 6923679 PRJNA562549_P_NODE_13486_length_313_cov_1.730159_g13253_i0 PRJNA562549 13486 313 1.730159 5.41539767 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.029   NTclustered gi|124806941|ref|XM_001350835.1| 36329 g13253 i0 100 0.0894568690095847 28 0 9 0 139 166 1770 1743 Plasmodium falciparum 3D7 conserved Plasmodium protein, unknown function (PF3D7_1248700), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
8198729 8198729 PRJNA562549_P_NODE_4867_length_520_cov_2.921569_g4646_i0 PRJNA562549 4867 520 2.921569 15.1921588 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 320 1.2699999999999998e-82   NTclustered gi|1534888114|gb|MK212222.1| 476202 g4646 i0 77.969 1.23076923076923 522 108 99 7 1 517 265 784 Cardiosporidium cionae isolate Cardio31 iron ABC transporter substrate-binding protein mRNA, complete cds blastn 640 320 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
10750247 10750247 PRJNA562549_P_NODE_9489_length_374_cov_1.153355_g9256_i0 PRJNA562549 9489 374 1.153355 4.3135477 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 239 2.55e-58   NTclustered gi|401402052|ref|XM_003881109.1| 572307 g9256 i0 81.597 63.9946524064171 288 53 77 0 87 374 379 92 Neospora caninum Liverpool putative ubiquitin / ribosomal protein CEP52 fusion protein (NCLIV_042000), partial mRNA blastn 23934 239 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
13299740 13299740 PRJNA562549_P_NODE_14091_length_306_cov_2.742857_g13858_i0 PRJNA562549 14091 306 2.742857 8.39314242 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 112 6.5e-30   NR XP_013229778.1 5802 g13858 i0 70.7 2.44117647058824 82 24 80.4 0 10 255 17 98 XP_013229778.1 ribosomal protein L41, putative [Eimeria tenella] diamond 747 112 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
18397724 18397724 PRJNA562549_P_NODE_35195_length_204_cov_1.734266_g34962_i0 PRJNA562549 35195 204 1.734266 3.53790264 Babesia duncani 323732 SAR_Eukaryotes SAR_Eukaryotes 84 4.53e-17   NR XP_067804442.1 323732 g34962 i0 59.1 1.95588235294118 66 26 97.1 1 200 3 115 179 XP_067804442.1 bifunctional Ribosomal protein L3 [Babesia duncani] diamond 399 84 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
18397734 18397734 PRJNA562549_P_NODE_36315_length_202_cov_1.489362_g36082_i0 PRJNA562549 36315 202 1.489362 3.00851124 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 123 7.059999999999998e-35   NR SBT79298.1 5858 g36082 i0 84.8 6.84653465346535 66 10 98 0 3 200 16 81 SBT79298.1 40S ribosomal protein S11, putative [Plasmodium malariae] diamond 1383 124 0.991935483870968 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
22222657 22222657 PRJNA562549_P_NODE_10478_length_355_cov_1.482993_g10245_i0 PRJNA562549 10478 355 1.482993 5.26462515 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 136 2.02e-36   NR XP_012333117.1 5857 g10245 i0 53.4 4.98591549295775 118 55 99.7 0 355 2 109 226 XP_012333117.1 60S acidic ribosomal protein P0 [Plasmodium fragile] diamond 1770 136 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium fragile
24772001 24772001 PRJNA562549_P_NODE_29260_length_218_cov_1.738854_g29027_i0 PRJNA562549 29260 218 1.738854 3.79070172 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.019   NTclustered gi|1027958315|ref|XM_016799264.1| 31271 g29027 i0 100 0.128440366972477 28 0 13 0 136 163 6417 6390 Plasmodium chabaudi chabaudi conserved Plasmodium protein, unknown function (PCHAS_1332500), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
25357145 25357145 PRJNA562549_P_NODE_24040_length_239_cov_1.460674_g23807_i0 PRJNA562549 24040 239 1.460674 3.49101086 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 100 4.279999999999999e-23   NR XP_026192714.1 88456 g23807 i0 62.8 1.9581589958159 78 28 97.9 1 5 238 250 326 XP_026192714.1 aspartate aminotransferase 1 [Cyclospora cayetanensis] diamond 468 100 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
27963512 27963512 PRJNA562549_P_NODE_11205_length_343_cov_1.248227_g10972_i0 PRJNA562549 11205 343 1.248227 4.28141861 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 57.8 3.74e-7   NR AET50831.1 5802 g10972 i0 42.6 1.06705539358601 61 33 53.4 1 342 160 19 77 AET50831.1 hypothetical protein [Eimeria tenella] diamond 366 57.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
28419615 28419615 PRJNA562549_P_NODE_37446_length_195_cov_2.701493_g37213_i0 PRJNA562549 37446 195 2.701493 5.26791135 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 78.6 1e-16   NR OEH75044.1 88456 g37213 i0 66.1 5.86153846153846 62 21 95.4 0 3 188 64 125 OEH75044.1 40s ribosomal protein [Cyclospora cayetanensis] diamond 1143 78.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
29195131 29195131 PRJNA562549_P_NODE_37269_length_197_cov_2.058824_g37036_i0 PRJNA562549 37269 197 2.058824 4.05588328 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.00381   NR CAL7864500.1 1344799 g37036 i0 44.7 2.05583756345178 38 20 57.9 1 2 115 69 105 CAL7864500.1 unnamed protein product [Sarcocystis calchasi] diamond 405 43.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
29699742 29699742 PRJNA562549_P_NODE_35730_length_203_cov_1.704225_g35497_i0 PRJNA562549 35730 203 1.704225 3.45957675 Theileria equi strain WA 1537102 SAR_Eukaryotes SAR_Eukaryotes 56.6 1.04e-7   NR XP_004828691.1 1537102 g35497 i0 43.3 0.990147783251232 67 36 97.5 2 198 1 100 165 XP_004828691.1 ubiquitin family member protein [Theileria equi strain WA] diamond 201 56.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
31058907 31058907 PRJNA562549_P_NODE_11575_length_337_cov_1.344203_g11342_i0 PRJNA562549 11575 337 1.344203 4.52996411 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 153 1.87e-41   NR XP_011130456.1 110365 g11342 i0 65.2 1.97626112759644 112 38 98.8 1 5 337 175 286 XP_011130456.1 asparaginyl-tRNA synthetase [Gregarina niphandrodes] diamond 666 153 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
31596404 31596404 PRJNA562549_P_NODE_37136_length_198_cov_2.102190_g36903_i0 PRJNA562549 37136 198 2.10219 4.1623362 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 77 1.76e-14   NR PVC53429.1 68886 g36903 i0 49.2 2 65 33 98.5 0 4 198 355 419 PVC53429.1 RabGDI protein [Theileria orientalis] diamond 396 77 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
31690977 31690977 PRJNA562549_P_NODE_21257_length_253_cov_1.250000_g21024_i0 PRJNA562549 21257 253 1.25 3.1625 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 50.8 5.59e-5   NR XP_028534310.1 85471 g21024 i0 43.5 0.545454545454545 46 26 54.5 0 252 115 41 86 XP_028534310.1 conserved Plasmodium protein, unknown function [Plasmodium relictum] diamond 138 50.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;