contig_metadata
14 rows where bioproject = "PRJNA562549" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9474351 | 9474351 | PRJNA562549_P_NODE_29988_length_215_cov_3.928571_g29755_i0 | PRJNA562549 | 29988 | 215 | 3.928571 | 8.44642765 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 136 | 3.28e-39 | NR | MCP5470421.1 | 2047757 | g29755 | i0 | 90.1 | 0.990697674418605 | 71 | 7 | 99.1 | 0 | 3 | 215 | 7 | 77 | MCP5470421.1 hypothetical protein [Chlamydiales bacterium] | diamond | 213 | 136 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 26762580 | 26762580 | PRJNA562549_P_NODE_25481_length_232_cov_3.795322_g25248_i0 | PRJNA562549 | 25481 | 232 | 3.795322 | 8.80514704 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 65.1 | 5.29e-12 | NR | NBC10562.1 | 2026780 | g25248 | i0 | 65.5 | 0.711206896551724 | 55 | 18 | 71.1 | 1 | 25 | 189 | 1 | 54 | NBC10562.1 YqaE/Pmp3 family membrane protein [Planctomycetota bacterium] | diamond | 165 | 65.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 26952389 | 26952389 | PRJNA562549_P_NODE_11782_length_334_cov_1.344322_g11549_i0 | PRJNA562549 | 11782 | 334 | 1.344322 | 4.49003548 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 110 | 1.81e-26 | NR | RYD71398.1 | 2026800 | g11549 | i0 | 56.6 | 0.889221556886228 | 99 | 42 | 88 | 1 | 299 | 6 | 229 | 327 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 297 | 110 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 27300480 | 27300480 | PRJNA562549_P_NODE_8243_length_400_cov_0.929204_g8010_i0 | PRJNA562549 | 8243 | 400 | 0.929204 | 3.716816 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 45.4 | 0.0181 | NR | MES2793200.1 | 2026780 | g8010 | i0 | 33.1 | 0.9525 | 127 | 63 | 85.5 | 7 | 354 | 13 | 95 | 212 | MES2793200.1 hypothetical protein [Planctomycetota bacterium] | diamond | 381 | 45.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 27679680 | 27679680 | PRJNA562549_P_NODE_10524_length_354_cov_1.720137_g10291_i0 | PRJNA562549 | 10524 | 354 | 1.720137 | 6.08928498 | Simkania sp. | 34094 | Bacteria | Bacteria | 85.9 | 1.2e-17 | NR | MCB1084310.1 | 34094 | g10291 | i0 | 89.6 | 0.406779661016949 | 48 | 5 | 40.7 | 0 | 235 | 92 | 81 | 128 | MCB1084310.1 hypothetical protein [Simkania sp.] | diamond | 144 | 85.9 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 27774317 | 27774317 | PRJNA562549_P_NODE_9784_length_368_cov_2.045603_g9551_i0 | PRJNA562549 | 9784 | 368 | 2.045603 | 7.52781904 | Simkania sp. | 34094 | Bacteria | Bacteria | 88.2 | 2.93e-19 | NR | MCB1084323.1 | 34094 | g9551 | i0 | 62.1 | 0.53804347826087 | 66 | 25 | 53.8 | 0 | 203 | 6 | 30 | 95 | MCB1084323.1 AMP-binding protein [Simkania sp.] | diamond | 198 | 88.2 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 27868701 | 27868701 | PRJNA562549_P_NODE_36045_length_203_cov_0.915493_g35812_i0 | PRJNA562549 | 36045 | 203 | 0.915493 | 1.85845079 | Simkania sp. | 34094 | Bacteria | Bacteria | 84 | 9.69e-18 | NR | MCB1084310.1 | 34094 | g35812 | i0 | 76.5 | 0.753694581280788 | 51 | 12 | 75.4 | 0 | 46 | 198 | 1 | 51 | MCB1084310.1 hypothetical protein [Simkania sp.] | diamond | 153 | 84 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 28595177 | 28595177 | PRJNA562549_P_NODE_19307_length_264_cov_2.192118_g19074_i0 | PRJNA562549 | 19307 | 264 | 2.192118 | 5.78719152 | Simkania sp. | 34094 | Bacteria | Bacteria | 178 | 2.2099999999999995e-55 | NR | MCB1084326.1 | 34094 | g19074 | i0 | 93.1 | 0.988636363636364 | 87 | 6 | 98.9 | 0 | 263 | 3 | 41 | 127 | MCB1084326.1 serine/threonine-protein kinase [Simkania sp.] | diamond | 261 | 178 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania sp. | |
| 28815765 | 28815765 | PRJNA562549_P_NODE_30468_length_214_cov_1.549020_g30235_i0 | PRJNA562549 | 30468 | 214 | 1.54902 | 3.3149028 | Lentisphaerota bacterium | 1932692 | Bacteria | Bacteria | 42 | 0.0484 | NR | MBE6357758.1 | 1932692 | g30235 | i0 | 42.2 | 0.630841121495327 | 45 | 22 | 57.5 | 1 | 53 | 175 | 347 | 391 | MBE6357758.1 glycosyltransferase family 39 protein [Lentisphaerota bacterium] | diamond | 135 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 29510557 | 29510557 | PRJNA562549_P_NODE_21210_length_253_cov_1.687500_g20977_i0 | PRJNA562549 | 21210 | 253 | 1.6875 | 4.269375 | Lentisphaerota bacterium | 1932692 | Bacteria | Bacteria | 46.6 | 0.0018600000000000001 | NR | MBE6406923.1 | 1932692 | g20977 | i0 | 52.2 | 1.64822134387352 | 46 | 22 | 54.5 | 0 | 250 | 113 | 267 | 312 | MBE6406923.1 tetratricopeptide repeat protein [Lentisphaerota bacterium] | diamond | 417 | 46.6 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 30016108 | 30016108 | PRJNA562549_P_NODE_36271_length_202_cov_1.687943_g36038_i0 | PRJNA562549 | 36271 | 202 | 1.687943 | 3.4096448600000002 | Pirellulaceae bacterium | 2699754 | Bacteria | Bacteria | 60.8 | 3.38e-9 | NR | MFK7736369.1 | 2699754 | g36038 | i0 | 58 | 0.742574257425743 | 50 | 20 | 74.3 | 1 | 191 | 42 | 21 | 69 | MFK7736369.1 peptidylprolyl isomerase [Pirellulaceae bacterium] | diamond | 150 | 60.8 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Pirellulaceae bacterium | ||
| 30092827 | 30092827 | PRJNA562549_P_NODE_18252_length_271_cov_1.890476_g18019_i0 | PRJNA562549 | 18252 | 271 | 1.890476 | 5.12318996 | Roseimaritima | 1579506 | Bacteria | Bacteria | 53.5 | 8.64e-6 | NR | WP_145352804.1 | 1930274 | g18019 | i0 | 40.4 | 4.91512915129151 | 89 | 46 | 98.5 | 2 | 5 | 271 | 151 | 232 | WP_145352804.1 DUF11 domain-containing protein [Roseimaritima multifibrata] | diamond | 1332 | 53.9 | 0.992578849721707 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Roseimaritima | Roseimaritima multifibrata | |
| 31216177 | 31216177 | PRJNA562549_P_NODE_26355_length_229_cov_1.654762_g26122_i0 | PRJNA562549 | 26355 | 229 | 1.654762 | 3.78940498 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 124 | 1.5799999999999999e-32 | NR | RYD65414.1 | 2026800 | g26122 | i0 | 83.8 | 0.96943231441048 | 74 | 12 | 96.9 | 0 | 225 | 4 | 99 | 172 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 222 | 124 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 31690974 | 31690974 | PRJNA562549_P_NODE_20217_length_259_cov_1.227273_g19984_i0 | PRJNA562549 | 20217 | 259 | 1.227273 | 3.17863707 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 42.4 | 0.045 | NR | MEI6341235.1 | 2026799 | g19984 | i0 | 44 | 0.579150579150579 | 50 | 26 | 55.6 | 1 | 103 | 246 | 109 | 158 | MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] | diamond | 150 | 42.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;