RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA562549" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA562549 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27711431 27711431 PRJNA562549_P_NODE_35504_length_204_cov_0.909091_g35271_i0 PRJNA562549 35504 204 0.909091 1.85454564 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 57.4 1.59e-7   NR HWX21912.1 2838779 g35271 i0 49.2 0.926470588235294 63 30 92.6 1 1 189 599 659 HWX21912.1 HYR domain-containing protein [Candidatus Binatia bacterium] diamond 189 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27805857 27805857 PRJNA562549_P_NODE_21444_length_252_cov_1.361257_g21211_i0 PRJNA562549 21444 252 1.361257 3.43036764 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 58.2 1.55e-7   NR HRP36369.1 2099670 g21211 i0 70.6 1.98809523809524 34 10 40.5 0 107 6 541 574 HRP36369.1 reverse transcriptase domain-containing protein [Candidatus Dojkabacteria bacterium] diamond 501 58.2 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
29731462 29731462 PRJNA562549_P_NODE_36030_length_203_cov_0.915493_g35797_i0 PRJNA562549 36030 203 0.915493 1.85845079 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 91.7 4.59e-20   NR MBI3780982.1 2072417 g35797 i0 60 10.5665024630542 65 26 96.1 0 9 203 114 178 MBI3780982.1 PD40 domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 2145 91.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30016107 30016107 PRJNA562549_P_NODE_36011_length_203_cov_0.915493_g35778_i0 PRJNA562549 36011 203 0.915493 1.85845079 Candidatus Doudnabacteria bacterium 2052150 Bacteria Bacteria 49.7 7.94e-5   NR MCA9375558.1 2052150 g35778 i0 41.8 2.61576354679803 67 33 99 1 201 1 108 168 MCA9375558.1 VCBS repeat-containing protein [Candidatus Doudnabacteria bacterium] diamond 531 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Doudnaibacteriota         Candidatus Doudnabacteria bacterium
30932292 30932292 PRJNA562549_P_NODE_34814_length_205_cov_0.902778_g34581_i0 PRJNA562549 34814 205 0.902778 1.8506949 Candidatus Anderseniibacteriota bacterium 2053502 Bacteria Bacteria 83.6 7.27e-17   NR MCA9388033.1 2053502 g34581 i0 53.7 0.980487804878049 67 31 98 0 3 203 237 303 MCA9388033.1 reverse transcriptase family protein [Candidatus Andersenbacteria bacterium] diamond 201 83.6 1 Bacteria Bacteria candidate phyla   Candidatus Anderseniibacteriota         Candidatus Anderseniibacteriota bacterium
31501491 31501491 PRJNA562549_P_NODE_9456_length_374_cov_2.690096_g9223_i0 PRJNA562549 9456 374 2.690096 10.06095904 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 45.4 0.0143   NR RTL06913.1 2030827 g9223 i0 36.5 0.505347593582888 63 35 47.3 2 371 195 108 169 RTL06913.1 MAG: hypothetical protein EKK58_03715 [Candidatus Dependentiae bacterium] diamond 189 45.4 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;