RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA561212" and tax_phylum = "Promethearchaeota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA561212 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13299423 13299423 PRJNA561212_P_NODE_17451_length_272_cov_1.140704_g17240_i0 PRJNA561212 17451 272 1.140704 3.10271488 Promethearchaeota archaeon 2053489 Archaea Archaea 52.8 0.025   NTclustered gi|2107767831|gb|CP070831.1| 2053489 g17240 i0 100 0.102941176470588 28 0 10 0 189 216 2348521 2348548 MAG: Promethearchaeota archaeon isolate bin108 chromosome blastn 28 52.8 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
29146002 29146002 PRJNA561212_P_NODE_20249_length_253_cov_0.866667_g20038_i0 PRJNA561212 20249 253 0.866667 2.19266751 root 1 Root_unresolved Root_unresolved 61.6 2.69e-9   NR MBN1801351.1 2053489 g20038 i0 38 3.77075098814229 92 44 94.9 4 240 1 57 147 MBN1801351.1 DUF4537 domain-containing protein [Promethearchaeota archaeon] diamond 954 61.6 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;