RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where bioproject = "PRJNA561212", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Viruses · 12 ✖

tax_phylum 1

  • Negarnaviricota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA561212 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14574200 14574200 PRJNA561212_P_NODE_10392_length_342_cov_2.193309_g10181_i0 PRJNA561212 10392 342 2.193309 7.50111678 brine shrimp yue-like virus 7 2900459 Viruses Viruses 616 9.139999999999999e-172   NTclustered gi|2209095278|gb|OL472843.1| 2900459 g10181 i0 100 4.86842105263158 333 0 97 0 1 333 1079 1411 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 2 hypothetical protein gene, complete cds blastn 1665 616 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
14574253 14574253 PRJNA561212_P_NODE_1312_length_944_cov_2.814007_g1146_i0 PRJNA561212 1312 944 2.814007 26.56422608 brine shrimp yue-like virus 7 2900459 Viruses Viruses 1729 0   NTclustered gi|2209095278|gb|OL472843.1| 2900459 g1146 i0 100 4.98940677966102 936 0 99 0 1 936 993 58 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 2 hypothetical protein gene, complete cds blastn 4710 1729 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
14574454 14574454 PRJNA561212_P_NODE_24692_length_244_cov_1.011696_g24481_i0 PRJNA561212 24692 244 1.011696 2.46853824 brine shrimp yue-like virus 7 2900459 Viruses Viruses 403 5.27e-108   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g24481 i0 97.458 4.83606557377049 236 6 97 0 9 244 6545 6310 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1180 403 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
14574533 14574533 PRJNA561212_P_NODE_5852_length_457_cov_0.765625_g5641_i0 PRJNA561212 5852 457 0.765625 3.49890625 Artemvirus bsafialis 3426459 Viruses Viruses 793 0   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g5641 i0 99.093 14.4748358862144 441 4 96 0 8 448 6501 6061 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 6615 793 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
19671863 19671863 PRJNA561212_P_NODE_18156_length_267_cov_1.128866_g17945_i0 PRJNA561212 18156 267 1.128866 3.01407222 Artemvirus bsafialis 3426459 Viruses Viruses 449 7.410000000000001e-122   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g17945 i0 99.593 13.8202247191011 246 1 92 0 10 255 1553 1798 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 3690 449 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
19671941 19671941 PRJNA561212_P_NODE_22796_length_248_cov_0.891429_g22585_i0 PRJNA561212 22796 248 0.891429 2.21074392 brine shrimp yue-like virus 7 2900459 Viruses Viruses 431 2.47e-116   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g22585 i0 100 4.69758064516129 233 0 94 0 9 241 6709 6477 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 1165 431 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
19672052 19672052 PRJNA561212_P_NODE_7176_length_410_cov_3.824926_g6965_i0 PRJNA561212 7176 410 3.824926 15.6821966 brine shrimp yue-like virus 7 2900459 Viruses Viruses 734 0   NTclustered gi|2209095276|gb|OL472842.1| 2900459 g6965 i0 99.751 4.89024390243902 401 0 98 1 10 410 7452 7851 MAG: Brine shrimp yue-like virus 7 isolate BH/15 segment 1 RNA-dependent RNA polymerase gene, complete cds blastn 2005 734 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 7
20947406 20947406 PRJNA561212_P_NODE_12077_length_320_cov_0.910931_g11866_i0 PRJNA561212 12077 320 0.910931 2.9149792 Artemvirus bsafialis 3426459 Viruses Viruses 525 1.4699999999999994e-144   NTclustered gi|2209095102|gb|OL472401.1| 2900376 g11866 i0 97.712 14.34375 306 6 95 1 10 314 624 319 MAG: Brine shrimp arlivirus 1 isolate GSL/15 hypothetical protein and RNA-dependent RNA polymerase genes, complete cds blastn 4590 525 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafialis
30710972 30710972 PRJNA561212_P_NODE_16334_length_280_cov_1.091787_g16123_i0 PRJNA561212 16334 280 1.091787 3.0570036 Hangzhou nephotettix cincticeps phenuivirus 1 2905447 Viruses Viruses 71.2 5.74e-12   NR UHK03292.1 2905447 g16123 i0 45.3 0.685714285714286 64 35 68.6 0 208 17 1554 1617 UHK03292.1 MAG: RNA-dependent RNA polymerase [Hangzhou nephotettix cincticeps phenuivirus 1] diamond 192 71.2 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Phenuiviridae   Hangzhou nephotettix cincticeps phenuivirus 1
31975656 31975656 PRJNA561212_P_NODE_1898_length_787_cov_30.278711_g1707_i0 PRJNA561212 1898 787 30.278711 238.29345557 Frijoles virus VP-161A 426788 Viruses Viruses 71.6 1.52e-11   NR YP_009665189.1 426788 g1707 i0 38.7 1.13214739517154 111 66 42.3 1 158 490 27 135 YP_009665189.1 N protein, partial [Frijoles virus VP-161A] diamond 891 71.6 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Hareavirales Phenuiviridae Phlebovirus Phlebovirus limboense
32292475 32292475 PRJNA561212_P_NODE_2199_length_735_cov_1.321752_g2002_i0 PRJNA561212 2199 735 1.321752 9.7148772 Fusarium culmorum yue-like virus 1 3233859 Viruses Viruses 89 4.23e-16   NR XCO56027.1 3233859 g2002 i0 30.4 1.66530612244898 204 130 83.3 2 114 725 575 766 XCO56027.1 MAG: putative RNA-dependent RNA polymerase [Fusarium culmorum yue-like virus 1] diamond 1224 89 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Fusarium culmorum yue-like virus 1
32418748 32418748 PRJNA561212_P_NODE_5659_length_465_cov_0.920918_g5448_i0 PRJNA561212 5659 465 0.920918 4.2822687 brine shrimp arlivirus 9 2900384 Viruses Viruses 284 1.13e-92   NR UNI74140.1 2900384 g5448 i0 92.8 1.96129032258065 152 11 98.1 0 10 465 198 349 UNI74140.1 MAG: hypothetical protein [brine shrimp arlivirus 9] diamond 912 284 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 9

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;