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contig_metadata

29 rows where bioproject = "PRJNA561212", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 29 ✖

tax_phylum 1

  • Chloroflexota · 29 ✖

tax_kingdom 1

bioproject 1

  • PRJNA561212 · 29 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8783601 8783601 PRJNA561212_P_NODE_10107_length_347_cov_1.218978_g9896_i0 PRJNA561212 10107 347 1.218978 4.22985366 Herpetosiphon 64 Bacteria Bacteria 603 7.229999999999999e-168   NTclustered gi|470482680|ref|NR_076546.1| 65 g9896 i0 99.696 5.68876080691643 329 1 95 0 10 338 1267 1595 Herpetosiphon aurantiacus strain DSM 785 23S ribosomal RNA gene, complete sequence blastn 1974 603 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae Herpetosiphon Herpetosiphon aurantiacus
9473940 9473940 PRJNA561212_P_NODE_19368_length_258_cov_1.427027_g19157_i0 PRJNA561212 19368 258 1.427027 3.68172966 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 58.4 5.05e-4   NTclustered gi|2874253860|emb|OY969916.1| 1672391 g19157 i0 100 0.12015503875969 31 0 12 0 190 220 4726206 4726236 MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 blastn 31 58.4 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
12024640 12024640 PRJNA561212_P_NODE_8190_length_383_cov_1.751613_g7979_i0 PRJNA561212 8190 383 1.751613 6.70867779 Anaerolineae bacterium 2052143 Bacteria Bacteria 179 5.309999999999999e-52   NR MCB0256767.1 2052143 g7979 i0 64.8 5.63968668407311 122 43 95.6 0 379 14 179 300 MCB0256767.1 phosphoribosylamine--glycine ligase [Anaerolineae bacterium] diamond 2160 179 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
22222368 22222368 PRJNA561212_P_NODE_1478_length_892_cov_3.887668_g1300_i0 PRJNA561212 1478 892 3.887668 34.67799856 Ktedonobacteria bacterium brp13 2717365 Bacteria Bacteria 197 5.97e-59   NR BCL82548.1 2717365 g1300 i0 46.4 0.746636771300448 222 98 74.7 4 71 736 1 201 BCL82548.1 superoxide dismutase [Ktedonobacteria bacterium brp13] diamond 666 197 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria       Ktedonobacteria bacterium brp13
23497939 23497939 PRJNA561212_P_NODE_9019_length_366_cov_1.197952_g8808_i0 PRJNA561212 9019 366 1.197952 4.38450432 Herpetosiphon aurantiacus 65 Bacteria Bacteria 575 1.6699999999999995e-159   NTclustered gi|159889572|gb|CP000875.1| 316274 g8808 i0 95.798 31.1065573770492 357 13 97 2 10 364 4626685 4627041 Herpetosiphon aurantiacus DSM 785, complete genome blastn 11385 575 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae Herpetosiphon Herpetosiphon aurantiacus
24771741 24771741 PRJNA561212_P_NODE_3320_length_606_cov_2.864916_g3114_i0 PRJNA561212 3320 606 2.864916 17.36139096 Candidatus Promineifilum breve 1806508 Bacteria Bacteria 573 1.0399999999999995e-158   NTclustered gi|1041165931|emb|LN890655.2| 1806508 g3114 i0 84.114 68.029702970297 598 90 98 5 2 597 597223 597817 Ardenticatena sp. Cfx-K strain Cfx-K genome assembly, chromosome: I blastn 41226 573 1 Bacteria   Bacillati Chloroflexota Ardenticatenia Candidatus Promineifilales Candidatus Promineifilaceae Candidatus Promineifilum Candidatus Promineifilum breve
27079090 27079090 PRJNA561212_P_NODE_21482_length_251_cov_0.876404_g21271_i0 PRJNA561212 21482 251 0.876404 2.19977404 Anaerolineales bacterium 2073117 Bacteria Bacteria 54.3 3.55e-6   NR MCB9436627.1 2073117 g21271 i0 56.3 0.573705179282869 48 21 57.4 0 239 96 1202 1249 MCB9436627.1 protein kinase [Anaerolineales bacterium] diamond 144 54.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
27110497 27110497 PRJNA561212_P_NODE_10602_length_340_cov_0.842697_g10391_i0 PRJNA561212 10602 340 0.842697 2.8651698 Ktedonobacteria bacterium brp13 2717365 Bacteria Bacteria 97.8 1.0100000000000002e-21   NR BCL80455.1 2717365 g10391 i0 43.8 0.926470588235294 105 53 92.6 1 11 325 136 234 BCL80455.1 class I SAM-dependent methyltransferase [Ktedonobacteria bacterium brp13] diamond 315 97.8 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria       Ktedonobacteria bacterium brp13
27141938 27141938 PRJNA561212_P_NODE_25062_length_244_cov_0.824561_g24851_i0 PRJNA561212 25062 244 0.824561 2.01192884 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 52.8 1.09e-5   NR HWH23965.1 3047546 g24851 i0 43.7 0.872950819672131 71 38 87.3 1 230 18 547 615 HWH23965.1 AAA family ATPase [Candidatus Limnocylindria bacterium] diamond 213 52.8 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
27472331 27472331 PRJNA561212_P_NODE_17063_length_275_cov_0.975248_g16852_i0 PRJNA561212 17063 275 0.975248 2.681932 Bacteria 2 Bacteria Bacteria 63.2 3.59e-9   NR WP_012615969.1 152260 g16852 i0 40.9 3.29454545454545 88 48 93.8 2 269 12 191 276 WP_012615969.1 chromosome condensation regulator RCC1 [Chloroflexus aggregans] diamond 906 63.5 0.995275590551181 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Chloroflexaceae Chloroflexus Chloroflexus aggregans
27489965 27489965 PRJNA561212_P_NODE_20843_length_252_cov_0.871508_g20632_i0 PRJNA561212 20843 252 0.871508 2.19620016 Ktedonobacteraceae bacterium 2740538 Bacteria Bacteria 80.5 8.02e-16   NR HZO73675.1 2740538 g20632 i0 58.7 1.5 63 26 75 0 56 244 46 108 HZO73675.1 peptidoglycan-binding domain-containing protein [Ktedonobacteraceae bacterium] diamond 378 80.5 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Ktedonobacteraceae   Ktedonobacteraceae bacterium
27630277 27630277 PRJNA561212_P_NODE_14044_length_298_cov_2.084444_g13833_i0 PRJNA561212 14044 298 2.084444 6.21164312 Bacillati 1783272 Bacteria Bacteria 106 6.760000000000001e-27   NR MBP8974854.1 2052143 g13833 i0 55.3 3.48322147651007 85 37 85.6 1 29 283 11 94 MBP8974854.1 50S ribosomal protein L13 [Anaerolineae bacterium] diamond 1038 106 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28215847 28215847 PRJNA561212_P_NODE_21486_length_251_cov_0.876404_g21275_i0 PRJNA561212 21486 251 0.876404 2.19977404 Chloroflexota bacterium 2026724 Bacteria Bacteria 93.6 5.37e-20   NR RLT20932.1 2026724 g21275 i0 57.3 0.896414342629482 75 31 89.6 1 17 241 872 945 RLT20932.1 MAG: hypothetical protein DWI30_08640, partial [Chloroflexota bacterium] diamond 225 93.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28215855 28215855 PRJNA561212_P_NODE_25646_length_242_cov_1.923077_g25435_i0 PRJNA561212 25646 242 1.923077 4.65384634 Candidatus Promineifilaceae bacterium 3085104 Bacteria Bacteria 51.2 3.41e-5   NR MFN2210270.1 3085104 g25435 i0 72.7 0.409090909090909 33 9 40.9 0 138 236 1 33 MFN2210270.1 SDR family NAD(P)-dependent oxidoreductase [Candidatus Promineifilaceae bacterium] diamond 99 51.2 1 Bacteria   Bacillati Chloroflexota Ardenticatenia Candidatus Promineifilales Candidatus Promineifilaceae   Candidatus Promineifilaceae bacterium
28356213 28356213 PRJNA561212_P_NODE_15346_length_287_cov_1.504673_g15135_i0 PRJNA561212 15346 287 1.504673 4.31841151 Chloroflexota 200795 Bacteria Bacteria 152 1.72e-40   NR HEX6778095.1 2306968 g15135 i0 70.5 5.9581881533101 95 28 99.3 0 286 2 547 641 HEX6778095.1 DPP IV N-terminal domain-containing protein [Ktedonobacterales bacterium] diamond 1710 152 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales     Ktedonobacterales bacterium
28405580 28405580 PRJNA561212_P_NODE_14826_length_291_cov_2.082569_g14615_i0 PRJNA561212 14826 291 2.082569 6.06027579 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 43.5 0.0363   NR HLC30384.1 2026734 g14615 i0 41.4 0.896907216494845 87 39 86.6 4 13 264 335 412 HLC30384.1 hypothetical protein [Dehalococcoidia bacterium] diamond 261 43.5 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
28531980 28531980 PRJNA561212_P_NODE_19127_length_260_cov_1.358289_g18916_i0 PRJNA561212 19127 260 1.358289 3.5315514 Chloroflexota bacterium 2026724 Bacteria Bacteria 43.1 0.0317   NR MBE3037550.1 2026724 g18916 i0 28.8 0.923076923076923 80 50 84.2 2 10 228 52 131 MBE3037550.1 glycosyltransferase family 4 protein [Chloroflexota bacterium] diamond 240 43.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30363882 30363882 PRJNA561212_P_NODE_2292_length_723_cov_2.092308_g2094_i0 PRJNA561212 2292 723 2.092308 15.12738684 Anaerolineales bacterium 2073117 Bacteria Bacteria 136 1.7e-34   NR HNJ14799.1 2073117 g2094 i0 35.1 3.99170124481328 251 131 92.1 5 666 1 41 288 HNJ14799.1 M35 family metallo-endopeptidase [Anaerolineales bacterium] diamond 2886 136 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
30679212 30679212 PRJNA561212_P_NODE_22853_length_248_cov_0.891429_g22642_i0 PRJNA561212 22853 248 0.891429 2.21074392 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 67.8 5.91e-11   NR MDD5339304.1 2026733 g22642 i0 65.9 3.7258064516129 44 15 53.2 0 110 241 2 45 MDD5339304.1 DNA cytosine methyltransferase [Dehalococcoidales bacterium] diamond 924 67.8 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium
30679224 30679224 PRJNA561212_P_NODE_6213_length_442_cov_2.013550_g6002_i0 PRJNA561212 6213 442 2.01355 8.899891 Caldilineaceae bacterium 2614250 Bacteria Bacteria 47.8 0.00214   NR MCE2466904.1 2614250 g6002 i0 34.3 0.671945701357466 99 64 67.2 1 302 6 67 164 MCE2466904.1 DUF2335 domain-containing protein [Caldilineaceae bacterium] diamond 297 47.8 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
30805829 30805829 PRJNA561212_P_NODE_25934_length_242_cov_0.923077_g25723_i0 PRJNA561212 25934 242 0.923077 2.23384634 Chloroflexaceae bacterium 2562117 Bacteria Bacteria 106 1.05e-27   NR MCS6883472.1 2562117 g25723 i0 74.2 2.46694214876033 66 17 81.8 0 37 234 3 68 MCS6883472.1 antibiotic biosynthesis monooxygenase [Chloroflexaceae bacterium] diamond 597 106 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Chloroflexaceae   Chloroflexaceae bacterium
30851272 30851272 PRJNA561212_P_NODE_10834_length_336_cov_1.558935_g10623_i0 PRJNA561212 10834 336 1.558935 5.2380216 Bacteria 2 Bacteria Bacteria 60.8 2.74e-9   NR MFH1381887.1 2026724 g10623 i0 40.6 4.88392857142857 64 38 57.1 0 283 92 14 77 MFH1381887.1 30S ribosomal protein S19 [Chloroflexota bacterium] diamond 1641 60.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31198429 31198429 PRJNA561212_P_NODE_25375_length_243_cov_0.917647_g25164_i0 PRJNA561212 25375 243 0.917647 2.22988221 Bacteria 2 Bacteria Bacteria 98.2 1.13e-21   NR MFM2309472.1 2026724 g25164 i0 55.4 5.38271604938272 74 33 91.4 0 229 8 584 657 MFM2309472.1 hypothetical protein [Chloroflexota bacterium] diamond 1308 98.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31469751 31469751 PRJNA561212_P_NODE_24536_length_245_cov_0.895349_g24325_i0 PRJNA561212 24536 245 0.895349 2.19360505 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 54.3 3.32e-6   NR MAT98943.1 2024896 g24325 i0 37.3 1.82448979591837 75 38 80.8 1 240 43 2156 2230 MAT98943.1 hypothetical protein [Anaerolineaceae bacterium] diamond 447 54.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
31785673 31785673 PRJNA561212_P_NODE_13237_length_307_cov_0.982906_g13026_i0 PRJNA561212 13237 307 0.982906 3.01752142 Caldilineaceae bacterium 2614250 Bacteria Bacteria 55.1 3.03e-6   NR MCB0160448.1 2614250 g13026 i0 41.3 1.76872964169381 92 46 83.1 2 41 295 2 92 MCB0160448.1 hypothetical protein [Caldilineaceae bacterium] diamond 543 55.1 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
32134023 32134023 PRJNA561212_P_NODE_3018_length_634_cov_1.005348_g2813_i0 PRJNA561212 3018 634 1.005348 6.37390632 Caldilineaceae bacterium 2614250 Bacteria Bacteria 310 2.04e-102   NR MBX3054751.1 2614250 g2813 i0 65.9 4.8217665615142 205 70 97 0 10 624 54 258 MBX3054751.1 endo alpha-1,4 polygalactosaminidase [Caldilineaceae bacterium] diamond 3057 310 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
32147881 32147881 PRJNA561212_P_NODE_16118_length_281_cov_2.076923_g15907_i0 PRJNA561212 16118 281 2.076923 5.83615363 Bacteria 2 Bacteria Bacteria 46.2 0.00361   NR MEO8357205.1 2026724 g15907 i0 31.4 3.40569395017794 86 58 91.8 1 273 16 497 581 MEO8357205.1 tetratricopeptide repeat protein [Chloroflexota bacterium] diamond 957 46.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32292478 32292478 PRJNA561212_P_NODE_23999_length_246_cov_0.901734_g23788_i0 PRJNA561212 23999 246 0.901734 2.21826564 Ktedonobacteraceae bacterium 2740538 Bacteria Bacteria 91.3 7.3e-20   NR HLX41732.1 2740538 g23788 i0 67.7 2.40243902439024 62 20 75.6 0 52 237 62 123 HLX41732.1 hypothetical protein [Ktedonobacteraceae bacterium] diamond 591 91.3 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Ktedonobacteraceae   Ktedonobacteraceae bacterium
32450534 32450534 PRJNA561212_P_NODE_16639_length_278_cov_1.097561_g16428_i0 PRJNA561212 16639 278 1.097561 3.05121958 Chloroflexota bacterium 2026724 Bacteria Bacteria 77.8 2.77e-14   NR MBI3978179.1 2026724 g16428 i0 50 0.949640287769784 88 37 95 2 275 12 1884 1964 MBI3978179.1 tandem-95 repeat protein [Chloroflexota bacterium] diamond 264 77.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;