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contig_metadata

18 rows where bioproject = "PRJNA561212", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 18 ✖

tax_phylum 1

  • Bdellovibrionota · 18 ✖

tax_kingdom 1

bioproject 1

  • PRJNA561212 · 18 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10749715 10749715 PRJNA561212_P_NODE_21429_length_251_cov_0.876404_g21218_i0 PRJNA561212 21429 251 0.876404 2.19977404 Bdellovibrio bacteriovorus 959 Bacteria Bacteria 298 2.65e-76   NTclustered gi|578016248|gb|CP002190.1| 765869 g21218 i0 89.451 541.629482071713 237 24 94 1 10 245 610539 610303 Bdellovibrio bacteriovorus W, complete genome blastn 135949 298 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
18397445 18397445 PRJNA561212_P_NODE_7035_length_415_cov_1.251462_g6824_i0 PRJNA561212 7035 415 1.251462 5.1935673 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 182 2.4499999999999998e-54   NR MCB0368864.1 2053517 g6824 i0 65.2 0.975903614457831 135 42 97.6 2 1 405 64 193 MCB0368864.1 C1 family peptidase [Bdellovibrionales bacterium] diamond 405 182 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
22222365 22222365 PRJNA561212_P_NODE_14578_length_293_cov_3.522727_g14367_i0 PRJNA561212 14578 293 3.522727 10.32159011 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 420 6.469999999999998e-113   NTclustered gi|1950812799|gb|CP066681.1| 349221 g14367 i0 94.505 263.184300341297 273 13 93 2 14 285 658548 658277 Micavibrio aeruginosavorus isolate NC_groundwater_70_Ag_B-0.1um_54_66 chromosome blastn 77113 420 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
22807829 22807829 PRJNA561212_P_NODE_14458_length_294_cov_4.108597_g14247_i0 PRJNA561212 14458 294 4.108597 12.07927518 Halobacteriovorax 1652133 Bacteria Bacteria 510 3.74e-140   NTclustered gi|1249980216|gb|CP017414.1| 97084 g14247 i0 100 308.676870748299 276 0 94 0 10 285 235265 234990 Halobacteriovorax marinus strain BE01 chromosome, complete genome blastn 90751 510 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae Halobacteriovorax Halobacteriovorax marinus
26635837 26635837 PRJNA561212_P_NODE_11921_length_321_cov_1.774194_g11710_i0 PRJNA561212 11921 321 1.774194 5.69516274 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 90.1 2.26e-18   NR MEZ4704431.1 3034175 g11710 i0 52.5 1.82242990654206 99 38 92.5 3 306 10 694 783 MEZ4704431.1 hypothetical protein [Bdellovibrionota bacterium] diamond 585 90.1 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
26649665 26649665 PRJNA561212_P_NODE_23581_length_246_cov_1.676301_g23370_i0 PRJNA561212 23581 246 1.676301 4.12370046 Bacteria 2 Bacteria Bacteria 55.1 1.77e-6   NR MBL7689555.1 2026715 g23370 i0 52.8 2.15853658536585 53 24 64.6 1 236 78 1277 1328 MBL7689555.1 putative Ig domain-containing protein [Pseudobdellovibrionaceae bacterium] diamond 531 55.5 0.992792792792793 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
27173728 27173728 PRJNA561212_P_NODE_26082_length_242_cov_0.881657_g25871_i0 PRJNA561212 26082 242 0.881657 2.13360994 Pigmentibacter ruber 2683196 Bacteria Bacteria 65.1 3.57e-10   NR BFD32711.1 2683196 g25871 i0 43.7 0.880165289256198 71 34 80.6 1 204 10 55 125 BFD32711.1 hypothetical protein GTC16762_23290 [Pigmentibacter ruber] diamond 213 65.1 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales Silvanigrellaceae Pigmentibacter Pigmentibacter ruber
27237079 27237079 PRJNA561212_P_NODE_17923_length_268_cov_2.297436_g17712_i0 PRJNA561212 17923 268 2.297436 6.15712848 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 79.3 6.65e-15   NR MCC7442433.1 2053517 g17712 i0 54.5 0.861940298507463 77 33 85.1 2 257 30 675 750 MCC7442433.1 hypothetical protein [Bdellovibrionales bacterium] diamond 231 79.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27584572 27584572 PRJNA561212_P_NODE_24344_length_245_cov_0.906977_g24133_i0 PRJNA561212 24344 245 0.906977 2.22209365 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 81.6 2.42e-17   NR MCB0371231.1 2053517 g24133 i0 81.6 0.6 49 9 60 0 48 194 112 160 MCB0371231.1 hypothetical protein [Bdellovibrionales bacterium] diamond 147 81.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28405599 28405599 PRJNA561212_P_NODE_6826_length_422_cov_0.787966_g6615_i0 PRJNA561212 6826 422 0.78796600000000006 3.32521652 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 70.5 5.33e-11   NR MDB9786543.1 2081706 g6615 i0 32.5 0.895734597156398 126 71 88.9 4 382 8 74 186 MDB9786543.1 S8 family peptidase [Bacteriovoracaceae bacterium] diamond 378 70.5 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
29605030 29605030 PRJNA561212_P_NODE_22930_length_248_cov_0.891429_g22719_i0 PRJNA561212 22930 248 0.891429 2.21074392 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 92.8 9.51e-20   NR MBT3983814.1 2081706 g22719 i0 59.2 2.78225806451613 76 30 91.9 1 239 12 334 408 MBT3983814.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 690 92.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
29650413 29650413 PRJNA561212_P_NODE_16970_length_275_cov_1.519802_g16759_i0 PRJNA561212 16970 275 1.519802 4.1794555 Pseudomonadati 3379134 Bacteria Bacteria 73.2 1.11e-12   NR OFZ31872.1 1797389 g16759 i0 49.3 2.38909090909091 73 36 79.6 1 23 241 987 1058 OFZ31872.1 MAG: hypothetical protein A2622_11675 [Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29] diamond 657 73.9 0.990527740189445 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium RIFCSPHIGHO2_01_FULL_40_29
30078957 30078957 PRJNA561212_P_NODE_25532_length_243_cov_0.917647_g25321_i0 PRJNA561212 25532 243 0.917647 2.22988221 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 83.6 1.19e-17   NR MCB0369273.1 2053517 g25321 i0 75 0.592592592592593 48 12 59.3 0 57 200 35 82 MCB0369273.1 hypothetical protein [Bdellovibrionales bacterium] diamond 144 83.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31248130 31248130 PRJNA561212_P_NODE_12435_length_315_cov_1.789256_g12224_i0 PRJNA561212 12435 315 1.789256 5.6361564 Micavibrio sp. 2024841 Bacteria Bacteria 57.4 4.34e-7   NR MBX2833619.1 2024841 g12224 i0 51.9 1.16190476190476 54 25 50.5 1 83 241 212 265 MBX2833619.1 carbonic anhydrase family protein [Micavibrio sp.] diamond 366 57.4 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
32007367 32007367 PRJNA561212_P_NODE_24818_length_244_cov_0.912281_g24607_i0 PRJNA561212 24818 244 0.912281 2.22596564 Bdellovibrionales bacterium RIFOXYD1_FULL_55_31 1797404 Bacteria Bacteria 61.6 8.64e-9   NR OFZ83107.1 1797404 g24607 i0 51.5 0.811475409836066 66 30 81.1 2 37 234 1082 1145 OFZ83107.1 MAG: hypothetical protein A2603_05625 [Bdellovibrionales bacterium RIFOXYD1_FULL_55_31] diamond 198 61.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium RIFOXYD1_FULL_55_31
32306338 32306338 PRJNA561212_P_NODE_22339_length_249_cov_0.886364_g22128_i0 PRJNA561212 22339 249 0.886364 2.20704636 Bacteria 2 Bacteria Bacteria 54.7 2.48e-6   NR MBU6154217.1 2053517 g22128 i0 46.1 2.75903614457831 76 40 91.6 1 11 238 808 882 MBU6154217.1 hypothetical protein [Bdellovibrionales bacterium] diamond 687 54.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32324078 32324078 PRJNA561212_P_NODE_17259_length_273_cov_1.475000_g17048_i0 PRJNA561212 17259 273 1.475 4.02675 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 136 1.5e-38   NR MCB0369646.1 2053517 g17048 i0 90 0.769230769230769 70 7 76.9 0 9 218 29 98 MCB0369646.1 50S ribosomal protein L22 [Bdellovibrionales bacterium] diamond 210 136 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32734399 32734399 PRJNA561212_P_NODE_17760_length_270_cov_1.071066_g17549_i0 PRJNA561212 17760 270 1.071066 2.8918782 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 86.3 2.56e-17   NR MEC7275530.1 3034175 g17549 i0 53.2 0.877777777777778 79 35 87.8 2 15 251 857 933 MEC7275530.1 choice-of-anchor D domain-containing protein [Bdellovibrionota bacterium] diamond 237 86.3 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;