RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA561212" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA561212 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31627653 31627653 PRJNA561212_P_NODE_23856_length_246_cov_0.901734_g23645_i0 PRJNA561212 23856 246 0.901734 2.21826564 Balneolales bacterium 2497613 Bacteria Bacteria 53.9 4.33e-6   NR MEX0780429.1 2497613 g23645 i0 37.7 2.64634146341463 77 48 93.9 0 9 239 474 550 MEX0780429.1 solute carrier family 26 protein [Balneolales bacterium] diamond 651 53.9 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales     Balneolales bacterium
32147885 32147885 PRJNA561212_P_NODE_9678_length_354_cov_1.459075_g9467_i0 PRJNA561212 9678 354 1.459075 5.1651255 Pseudomonadati 3379134 Bacteria Bacteria 44.3 0.0347   NR MFO7847684.1 2053516 g9467 i0 39.2 1.26271186440678 79 42 66.9 1 257 21 130 202 MFO7847684.1 heavy metal translocating P-type ATPase [Balneolaceae bacterium] diamond 447 44.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;