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contig_metadata

31 rows where bioproject = "PRJNA561212", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 31 ✖

tax_phylum 1

  • Acidobacteriota · 31 ✖

tax_kingdom 1

bioproject 1

  • PRJNA561212 · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1821125 1821125 PRJNA561212_P_NODE_242_length_1872_cov_4.813230_g187_i0 PRJNA561212 242 1872 4.81323 90.1036656 Pseudomonadati 3379134 Bacteria Bacteria 649 2.899999999999999e-223   NR HEX9701007.1 1978231 g187 i0 61.1 22.7483974358974 568 199 90.1 10 8 1693 178 729 HEX9701007.1 malate synthase G [Acidobacteriota bacterium] diamond 42585 649 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
5649252 5649252 PRJNA561212_P_NODE_24125_length_245_cov_1.296512_g23914_i0 PRJNA561212 24125 245 1.296512 3.1764544 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 134 2.28e-34   NR MBY0375661.1 2212468 g23914 i0 96 0.918367346938776 75 3 91.8 0 235 11 593 667 MBY0375661.1 HAD-IC family P-type ATPase [Bryobacteraceae bacterium] diamond 225 134 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
5649323 5649323 PRJNA561212_P_NODE_4825_length_504_cov_1.552204_g4615_i0 PRJNA561212 4825 504 1.552204 7.82310816 Blastocatellia bacterium 2052146 Bacteria Bacteria 237 2.82e-74   NR HYE72838.1 2052146 g4615 i0 67.7 0.976190476190476 164 52 97 1 497 9 185 348 HYE72838.1 nucleotide sugar dehydrogenase [Blastocatellia bacterium] diamond 492 237 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
13299462 13299462 PRJNA561212_P_NODE_19671_length_256_cov_1.322404_g19460_i0 PRJNA561212 19671 256 1.322404 3.38535424 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 370 5.66e-98   NTclustered gi|117557513|emb|AM180902.2| 171953 g19460 i0 94.583 130.8359375 240 11 93 2 9 247 422 184 Uncultured Acidobacteria bacterium partial 23S rRNA gene, clone ZC6 blastn 33494 370 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
13299477 13299477 PRJNA561212_P_NODE_20891_length_252_cov_0.871508_g20680_i0 PRJNA561212 20891 252 0.871508 2.19620016 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 294 3.44e-75   NTclustered gi|2874254108|emb|OY970193.1| 171953 g20680 i0 89.362 59.4563492063492 235 23 93 2 10 243 1689567 1689334 MAG: uncultured Acidobacteriota bacterium isolate MFD09206.bin.1.42 genome assembly, chromosome: 1 blastn 14983 294 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26635838 26635838 PRJNA561212_P_NODE_1241_length_969_cov_2.071429_g1076_i0 PRJNA561212 1241 969 2.071429 20.07214701 Terriglobales bacterium 2282142 Bacteria Bacteria 287 5.71e-92   NR HEX4426372.1 2282142 g1076 i0 47.6 0.904024767801858 292 152 90.1 1 29 901 50 341 HEX4426372.1 glycosyl hydrolase family 18 protein [Terriglobales bacterium] diamond 876 287 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27205282 27205282 PRJNA561212_P_NODE_2942_length_644_cov_1.182137_g2737_i0 PRJNA561212 2942 644 1.182137 7.61296228 Terriglobales bacterium 2282142 Bacteria Bacteria 63.9 6.82e-8   NR HMH02381.1 2282142 g2737 i0 70.3 0.321428571428571 37 11 17.2 0 20 130 384 420 HMH02381.1 thrombospondin type 3 repeat-containing protein [Terriglobales bacterium] diamond 207 63.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
27363866 27363866 PRJNA561212_P_NODE_17523_length_271_cov_2.792929_g17312_i0 PRJNA561212 17523 271 2.792929 7.56883759 Acidobacteriota bacterium 1978231 Bacteria Bacteria 60.1 3.63e-8   NR PYX29795.1 1978231 g17312 i0 35.2 2.87822878228782 88 53 97.4 2 267 4 74 157 PYX29795.1 MAG: alpha/beta hydrolase [Acidobacteriota bacterium] diamond 780 60.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27426927 27426927 PRJNA561212_P_NODE_11963_length_321_cov_1.185484_g11752_i0 PRJNA561212 11963 321 1.185484 3.80540364 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 48.1 0.00112   NR HEX6095586.1 2651171 g11752 i0 57.1 0.327102803738318 35 15 32.7 0 315 211 128 162 HEX6095586.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 105 48.1 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
27616288 27616288 PRJNA561212_P_NODE_10744_length_337_cov_1.943182_g10533_i0 PRJNA561212 10744 337 1.943182 6.54852334 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 43.9 0.0398   NR MBV8819464.1 2052142 g10533 i0 57.1 0.311572700296736 35 15 31.2 0 58 162 320 354 MBV8819464.1 molybdopterin-dependent oxidoreductase [Acidobacteriaceae bacterium] diamond 105 43.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
28184276 28184276 PRJNA561212_P_NODE_21686_length_250_cov_1.000000_g21475_i0 PRJNA561212 21686 250 1 2.5 Acidobacteriota bacterium 1978231 Bacteria Bacteria 53.1 8.83e-6   NR MBI3952321.1 1978231 g21475 i0 56.4 0.468 39 17 46.8 0 123 7 45 83 MBI3952321.1 M28 family metallopeptidase [Acidobacteriota bacterium] diamond 117 53.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28215842 28215842 PRJNA561212_P_NODE_19446_length_257_cov_2.326087_g19235_i0 PRJNA561212 19446 257 2.326087 5.97804359 Acidobacteriota bacterium 1978231 Bacteria Bacteria 58.9 8.41e-8   NR MEM9558211.1 1978231 g19235 i0 40.8 0.88715953307393 76 43 88.7 1 241 14 236 309 MEM9558211.1 cellulase family glycosylhydrolase [Acidobacteriota bacterium] diamond 228 58.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28468871 28468871 PRJNA561212_P_NODE_12366_length_316_cov_1.526749_g12155_i0 PRJNA561212 12366 316 1.526749 4.82452684 Acidobacteriota bacterium 1978231 Bacteria Bacteria 49.3 4.32e-4   NR MEY4634636.1 1978231 g12155 i0 48.4 0.607594936708861 64 30 59.8 3 295 107 263 324 MEY4634636.1 hypothetical protein [Acidobacteriota bacterium] diamond 192 49.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28721363 28721363 PRJNA561212_P_NODE_21787_length_250_cov_0.881356_g21576_i0 PRJNA561212 21787 250 0.881356 2.20339 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 43.5 0.0212   NR HUJ41621.1 2952895 g21576 i0 53.4 0.696 58 22 67.2 2 217 50 241 295 HUJ41621.1 anthranilate phosphoribosyltransferase [Candidatus Acidiferrales bacterium] diamond 174 43.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
28752822 28752822 PRJNA561212_P_NODE_18567_length_264_cov_1.136126_g18356_i0 PRJNA561212 18567 264 1.136126 2.99937264 Blastocatellia bacterium 2052146 Bacteria Bacteria 58.2 1.72e-7   NR HYE71701.1 2052146 g18356 i0 32.1 0.886363636363636 78 53 88.6 0 254 21 201 278 HYE71701.1 hypothetical protein [Blastocatellia bacterium] diamond 234 58.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
28956439 28956439 PRJNA561212_P_NODE_1308_length_946_cov_2.943872_g1142_i0 PRJNA561212 1308 946 2.943872 27.84902912 root 1 Root_unresolved Root_unresolved 419 4.3599999999999985e-145   NR WP_031498959.1 360054 g1142 i0 73.1 17.6257928118393 275 74 87.2 0 108 932 5 279 WP_031498959.1 HpcH/HpaI aldolase family protein [Bryobacter aggregatus] diamond 16674 419 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae Bryobacter Bryobacter aggregatus
28974008 28974008 PRJNA561212_P_NODE_14908_length_291_cov_1.091743_g14697_i0 PRJNA561212 14908 291 1.091743 3.17697213 Blastocatellia bacterium 2052146 Bacteria Bacteria 57 5.84e-7   NR HEY9431242.1 2052146 g14697 i0 64.1 1.60824742268041 39 14 40.2 0 284 168 5 43 HEY9431242.1 tetratricopeptide repeat protein [Blastocatellia bacterium] diamond 468 57 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
29005872 29005872 PRJNA561212_P_NODE_9988_length_349_cov_1.275362_g9777_i0 PRJNA561212 9988 349 1.275362 4.45101338 Acidobacteriota bacterium 1978231 Bacteria Bacteria 85.9 2.94e-17   NR MDY7093792.1 1978231 g9777 i0 46 1.71060171919771 100 44 85.1 3 16 312 120 210 MDY7093792.1 zinc metalloprotease [Acidobacteriota bacterium] diamond 597 85.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29068752 29068752 PRJNA561212_P_NODE_12948_length_310_cov_1.185654_g12737_i0 PRJNA561212 12948 310 1.185654 3.6755274 Holophaga foetida 35839 Bacteria Bacteria 63.5 2.34e-9   NR WP_005036975.1 35839 g12737 i0 42.2 0.987096774193548 102 57 97.7 2 305 3 16 116 WP_005036975.1 pyrroline-5-carboxylate reductase [Holophaga foetida] diamond 306 63.5 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Holophaga Holophaga foetida
29114195 29114195 PRJNA561212_P_NODE_3168_length_618_cov_2.080734_g2963_i0 PRJNA561212 3168 618 2.080734 12.85893612 Bacteria 2 Bacteria Bacteria 129 6.19e-31   NR MCX6604094.1 1978231 g2963 i0 42.3 4.37864077669903 168 91 80.6 3 121 618 338 501 MCX6604094.1 choice-of-anchor I family protein [Acidobacteriota bacterium] diamond 2706 129 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29478772 29478772 PRJNA561212_P_NODE_10650_length_339_cov_1.105263_g10439_i0 PRJNA561212 10650 339 1.105263 3.74684157 Acidobacteriota bacterium 1978231 Bacteria Bacteria 44.3 0.0302   NR MEW6366080.1 1978231 g10439 i0 35.1 0.68141592920354 77 45 68.1 2 51 281 284 355 MEW6366080.1 hypothetical protein [Acidobacteriota bacterium] diamond 231 44.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29636545 29636545 PRJNA561212_P_NODE_16310_length_280_cov_1.328502_g16099_i0 PRJNA561212 16310 280 1.328502 3.7198056 Acidobacteriota bacterium 1978231 Bacteria Bacteria 46.6 0.00259   NR PYU31083.1 1978231 g16099 i0 55.6 2.74285714285714 45 20 48.2 0 29 163 62 106 PYU31083.1 MAG: hypothetical protein DMG28_16400 [Acidobacteriota bacterium] diamond 768 46.6 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29636560 29636560 PRJNA561212_P_NODE_6090_length_447_cov_1.874332_g5879_i0 PRJNA561212 6090 447 1.874332 8.37826404 Blastocatellia bacterium 2052146 Bacteria Bacteria 70.1 8.68e-11   NR HYE71701.1 2052146 g5879 i0 29.4 0.912751677852349 136 96 91.3 0 442 35 268 403 HYE71701.1 hypothetical protein [Blastocatellia bacterium] diamond 408 70.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
30061222 30061222 PRJNA561212_P_NODE_25711_length_242_cov_1.331361_g25500_i0 PRJNA561212 25711 242 1.331361 3.22189362 Pseudomonadati 3379134 Bacteria Bacteria 60.5 3.1e-9   NR HUX45116.1 1964191 g25500 i0 37.3 6.48347107438016 75 47 93 0 10 234 61 135 HUX45116.1 GyrI-like domain-containing protein [Terracidiphilus sp.] diamond 1569 60.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Terracidiphilus Terracidiphilus sp.
30458655 30458655 PRJNA561212_P_NODE_25373_length_243_cov_0.917647_g25162_i0 PRJNA561212 25373 243 0.917647 2.22988221 Blastocatellia bacterium 2052146 Bacteria Bacteria 118 1.03e-29   NR HYE75320.1 2052146 g25162 i0 74.3 1.82716049382716 74 19 91.4 0 230 9 296 369 HYE75320.1 nicotinate phosphoribosyltransferase [Blastocatellia bacterium] diamond 444 118 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
31533035 31533035 PRJNA561212_P_NODE_2756_length_663_cov_1.376271_g2551_i0 PRJNA561212 2756 663 1.376271 9.12467673 Thermoanaerobaculales bacterium 2873827 Bacteria Bacteria 62.8 1.77e-7   NR MCU0233035.1 2873827 g2551 i0 25.7 1.80090497737557 179 100 80.5 5 654 121 78 224 MCU0233035.1 hypothetical protein [Thermoanaerobaculales bacterium] diamond 1194 62.8 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia Thermoanaerobaculales     Thermoanaerobaculales bacterium
31673198 31673198 PRJNA561212_P_NODE_657_length_1256_cov_7.681319_g545_i0 PRJNA561212 657 1256 7.681319 96.47736664 Pseudomonadati 3379134 Bacteria Bacteria 50.1 0.00687   NR HEV8435252.1 2651171 g545 i0 36.7 0.857484076433121 128 64 28.9 7 1025 663 32 149 HEV8435252.1 CVNH domain-containing protein [Thermoanaerobaculia bacterium] diamond 1077 50.1 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
32545472 32545472 PRJNA561212_P_NODE_18379_length_265_cov_1.322917_g18168_i0 PRJNA561212 18379 265 1.322917 3.50573005 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 41.6 0.023   NR HEV3220821.1 2952895 g18168 i0 42.6 0.690566037735849 61 27 61.1 3 220 59 8 67 HEV3220821.1 glutaredoxin domain-containing protein [Candidatus Acidiferrales bacterium] diamond 183 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
32748123 32748123 PRJNA561212_P_NODE_2720_length_666_cov_2.605396_g2515_i0 PRJNA561212 2720 666 2.605396 17.35193736 Pseudomonadati 3379134 Bacteria Bacteria 70.5 2.13e-10   NR HEV8370346.1 2283092 g2515 i0 31 1.75225225225225 184 116 78.4 3 66 587 47 229 HEV8370346.1 DUF6748 domain-containing protein [Pyrinomonadaceae bacterium] diamond 1167 71.2 0.990168539325843 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32765630 32765630 PRJNA561212_P_NODE_13620_length_303_cov_0.982609_g13409_i0 PRJNA561212 13620 303 0.982609 2.97730527 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 43.5 0.0128   NR HTH37695.1 2283092 g13409 i0 41.7 0.594059405940594 60 31 59.4 3 215 36 34 89 HTH37695.1 VOC family protein [Pyrinomonadaceae bacterium] diamond 180 43.5 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32765640 32765640 PRJNA561212_P_NODE_22920_length_248_cov_0.891429_g22709_i0 PRJNA561212 22920 248 0.891429 2.21074392 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 71.2 3.53e-12   NR HJT17224.1 2651171 g22709 i0 51.9 0.955645161290323 79 33 93.1 2 9 239 299 374 HJT17224.1 S8 family serine peptidase [Thermoanaerobaculia bacterium] diamond 237 71.2 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;