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contig_metadata

11 rows where bioproject = "PRJNA561212" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 11 ✖

bioproject 1

  • PRJNA561212 · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18397263 18397263 PRJNA561212_P_NODE_19255_length_259_cov_1.209677_g19044_i0 PRJNA561212 19255 259 1.209677 3.13306343 Natrialba magadii 13769 Archaea Archaea 52.8 0.024   NTclustered gi|289529249|gb|CP001932.1| 547559 g19044 i0 100 0.108108108108108 28 0 11 0 24 51 3672109 3672082 Natrialba magadii ATCC 43099, complete sequence blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrialba Natrialba magadii
20947434 20947434 PRJNA561212_P_NODE_13977_length_299_cov_1.274336_g13766_i0 PRJNA561212 13977 299 1.274336 3.81026464 Methanolobus sp. ZRKC2 3125783 Archaea Archaea 78.7 4.59e-10   NTclustered gi|2708450131|gb|CP146980.1| 3125783 g13766 i0 90.164 0.204013377926421 61 4 20 2 240 299 639879 639820 Methanolobus sp. ZRKC2 chromosome, complete genome blastn 61 78.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sp. ZRKC2
26681416 26681416 PRJNA561212_P_NODE_5301_length_480_cov_1.454545_g5090_i0 PRJNA561212 5301 480 1.454545 6.981816 Methanobacteriati 3366610 Archaea Archaea 196 1.8500000000000002e-59   NR MBH33411.1 2026739 g5090 i0 65.6 13.49375 151 47 94.4 1 466 14 45 190 MBH33411.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Methanobacteriota archaeon] diamond 6477 196 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28387811 28387811 PRJNA561212_P_NODE_16746_length_277_cov_1.308824_g16535_i0 PRJNA561212 16746 277 1.308824 3.62544248 Methanobacteriati 3366610 Archaea Archaea 54.7 3.63e-6   NR MAV02704.1 2026739 g16535 i0 46.3 8.29602888086643 54 29 58.5 0 19 180 38 91 MAV02704.1 hypothetical protein [Methanobacteriota archaeon] diamond 2298 54.7 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28689924 28689924 PRJNA561212_P_NODE_13487_length_304_cov_1.896104_g13276_i0 PRJNA561212 13487 304 1.896104 5.76415616 Candidatus Methanoxibalbensis ujae 2977099 Archaea Archaea 59.7 8.96e-8   NR MCW3136373.1 2977099 g13276 i0 36.7 0.888157894736842 90 52 88.8 2 279 10 962 1046 MCW3136373.1 carboxypeptidase regulatory-like domain-containing protein [Candidatus Methanoxibalbensis ujae] diamond 270 59.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Methanophagales Candidatus Methanospirareceae Candidatus Methanoxibalbensis Candidatus Methanoxibalbensis ujae
29321110 29321110 PRJNA561212_P_NODE_18649_length_263_cov_1.515789_g18438_i0 PRJNA561212 18649 263 1.515789 3.98652507 Methanobacteriota archaeon 2026739 Archaea Archaea 57 4.69e-7   NR MBU38768.1 2026739 g18438 i0 51.9 0.593155893536122 52 24 59.3 1 10 165 856 906 MBU38768.1 hypothetical protein [Methanobacteriota archaeon] diamond 156 57 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29321129 29321129 PRJNA561212_P_NODE_9689_length_354_cov_1.270463_g9478_i0 PRJNA561212 9689 354 1.270463 4.49743902 Methanobacterium sp. 2164 Archaea Archaea 67.8 2.05e-10   NR MCE5214616.1 2164 g9478 i0 35.6 6.05084745762712 101 59 85.6 2 40 342 70 164 MCE5214616.1 translation elongation factor EF-1 subunit alpha [Methanobacterium sp.] diamond 2142 67.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
29731387 29731387 PRJNA561212_P_NODE_4730_length_510_cov_1.093822_g4521_i0 PRJNA561212 4730 510 1.093822 5.5784922 Methanobacteriota archaeon 2026739 Archaea Archaea 177 5.279999999999999e-52   NR MBU04005.1 2026739 g4521 i0 54.3 14.4647058823529 164 72 96.5 1 14 505 36 196 MBU04005.1 hypothetical protein [Methanobacteriota archaeon] diamond 7377 177 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29808585 29808585 PRJNA561212_P_NODE_4871_length_501_cov_2.023364_g4661_i0 PRJNA561212 4871 501 2.023364 10.13705364 root 1 Root_unresolved Root_unresolved 106 1.67e-24   NR MEA3199455.1 1906666 g4661 i0 46.7 4.31736526946108 120 63 71.9 1 363 4 3 121 MEA3199455.1 3-hydroxybutyryl-CoA dehydrogenase [Thermoplasmata archaeon] diamond 2163 106 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30963918 30963918 PRJNA561212_P_NODE_5034_length_493_cov_1.795238_g4823_i0 PRJNA561212 5034 493 1.795238 8.85052334 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 194 1.48e-60   NR HJM77902.1 2670411 g4823 i0 78.8 2.15415821501014 118 25 71.8 0 354 1 5 122 HJM77902.1 3,4-dihydroxy-2-butanone-4-phosphate synthase [Candidatus Thalassarchaeaceae archaeon] diamond 1062 194 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
31831230 31831230 PRJNA561212_P_NODE_19557_length_257_cov_1.179348_g19346_i0 PRJNA561212 19557 257 1.179348 3.03092436 Archaea 2157 Archaea Archaea 60.5 2.63e-8   NR MDP6889438.1 2670411 g19346 i0 44.1 1.37743190661479 59 28 68.9 1 80 256 53 106 MDP6889438.1 putative Ig domain-containing protein [Candidatus Thalassarchaeaceae archaeon] diamond 354 60.5 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;