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contig_metadata

27 rows where bioproject = "PRJNA561212", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 27 ✖

tax_kingdom 1

  • Metazoa · 27 ✖

tax_clade 1

bioproject 1

  • PRJNA561212 · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1821249 1821249 PRJNA561212_P_NODE_8382_length_379_cov_1.578431_g8171_i0 PRJNA561212 8382 379 1.578431 5.98225349 root 1 Root_unresolved Root_unresolved 191 1.4999999999999997e-56   NR XP_024507206.1 34506 g8171 i0 74.8 49.9947229551451 119 30 94.2 0 11 367 153 271 XP_024507206.1 Cysteine desulfurase, mitochondrial [Strongyloides ratti] diamond 18948 191 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
5649381 5649381 PRJNA561212_P_NODE_8085_length_386_cov_0.971246_g7874_i0 PRJNA561212 8085 386 0.971246 3.74900956 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 127 1.37e-32   NR CAD5226272.1 6326 g7874 i0 45.6 32.5336787564767 125 63 97.2 1 2 376 98 217 CAD5226272.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 12558 127 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
6923546 6923546 PRJNA561212_P_NODE_4266_length_536_cov_1.412527_g4057_i0 PRJNA561212 4266 536 1.412527 7.57114472 Heterodera glycines 51029 Nematoda Nematoda 265 6.21e-66   NTclustered gi|3676825|gb|AF092449.1|AF092449 51029 g4057 i0 84.364 0.675373134328358 275 38 67 3 220 490 653 380 Heterodera glycines mucin-like protein (svg-1) mRNA, complete cds blastn 362 265 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera glycines
14574351 14574351 PRJNA561212_P_NODE_1852_length_798_cov_12.270345_g1664_i0 PRJNA561212 1852 798 12.270345 97.9173531 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 308 3.1499999999999996e-94   NR MCP9264969.1 6287 g1664 i0 70.4 15.6015037593985 206 61 77.4 0 21 638 801 1006 MCP9264969.1 60S ribosomal protein L10 [Dirofilaria immitis] diamond 12450 309 0.996763754045307 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
15158754 15158754 PRJNA561212_P_NODE_4572_length_516_cov_4.198646_g4363_i0 PRJNA561212 4572 516 4.198646 21.66501336 Pristionchus 54125 Nematoda Nematoda 191 1.0299999999999998e-43   NTclustered gi|150982121|gb|EF634649.1| 358041 g4363 i0 85.955 13.6627906976744 178 25 34 0 277 454 204 27 Pristionchus uniformis large subunit ribosomal protein 27a (rpl-27a) mRNA, partial cds blastn 7050 191 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus uniformis
18982092 18982092 PRJNA561212_P_NODE_6175_length_444_cov_1.428571_g5964_i0 PRJNA561212 6175 444 1.428571 6.34285524 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 134 9.909999999999998e-37   NR KAL1239686.1 6337 g5964 i0 53.8 5.19594594594595 119 52 78.4 1 389 42 58 176 KAL1239686.1 Large ribosomal subunit protein [Trichinella pseudospiralis] diamond 2307 135 0.992592592592593 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
19672068 19672068 PRJNA561212_P_NODE_8416_length_378_cov_2.334426_g8205_i0 PRJNA561212 8416 378 2.334426 8.82413028 Ecumenicus sp. 85G11 2592549 Nematoda Nematoda 588 2.2199999999999993e-163   NTclustered gi|1702224030|gb|MK292127.1| 2592549 g8205 i0 96.359 88.8412698412698 357 13 94 0 10 366 3044 3400 Ecumenicus sp. 85G11 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 33582 588 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dorylaimida Qudsianematidae Ecumenicus Ecumenicus sp. 85G11
23497790 23497790 PRJNA561212_P_NODE_2299_length_722_cov_1.949153_g2101_i0 PRJNA561212 2299 722 1.949153 14.07288466 Caenorhabditis remanei 31234 Nematoda Nematoda 182 8.83e-41   NTclustered gi|2445362687|ref|XM_053726842.1| 31234 g2101 i0 85 26.0886426592798 180 26 25 1 523 701 1451 1272 Caenorhabditis remanei uncharacterized protein (GCK72_008464), partial mRNA blastn 18836 182 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
26667330 26667330 PRJNA561212_P_NODE_8761_length_371_cov_1.432886_g8550_i0 PRJNA561212 8761 371 1.432886 5.31600706 Steinernema carpocapsae 34508 Nematoda Nematoda 60.5 7.71e-8   NR TKR66619.1 34508 g8550 i0 37.2 0.695417789757412 86 38 63.9 3 346 110 90 166 TKR66619.1 hypothetical protein L596_022888 [Steinernema carpocapsae] diamond 258 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
26794321 26794321 PRJNA561212_P_NODE_21221_length_251_cov_0.876404_g21010_i0 PRJNA561212 21221 251 0.876404 2.19977404 Ancylostoma ceylanicum 53326 Nematoda Nematoda 53.1 8.68e-6   NR EPB72407.1 53326 g21010 i0 44.8 3.31075697211155 58 27 69.3 2 240 67 400 452 EPB72407.1 Sec1 family protein [Ancylostoma ceylanicum] diamond 831 53.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
26966418 26966418 PRJNA561212_P_NODE_11322_length_329_cov_1.816406_g11111_i0 PRJNA561212 11322 329 1.816406 5.97597574 Rhabditida 6236 Nematoda Nematoda 47.8 0.00181   NR KHN74937.1 6265 g11111 i0 50 0.957446808510638 38 19 34.7 0 288 175 196 233 KHN74937.1 Protein lin-12 [Toxocara canis] diamond 315 48.1 0.993762993762994 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
27426947 27426947 PRJNA561212_P_NODE_7783_length_393_cov_1.234375_g7572_i0 PRJNA561212 7783 393 1.234375 4.85109375 Aphelenchoides avenae 70226 Nematoda Nematoda 112 1.01e-27   NR KAH7727115.1 70226 g7572 i0 48.5 0.755725190839695 99 51 75.6 0 5 301 122 220 KAH7727115.1 glutaredoxin 2 [Aphelenchoides avenae] diamond 297 112 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
27521387 27521387 PRJNA561212_P_NODE_2903_length_647_cov_12.109756_g2698_i0 PRJNA561212 2903 647 12.109756 78.35012132 Diploscapter pachys 2018661 Nematoda Nematoda 119 3.38e-30   NR PAV88325.1 2018661 g2698 i0 46.8 1.27975270479134 139 74 64.5 0 50 466 1 139 PAV88325.1 hypothetical protein WR25_07571 [Diploscapter pachys] diamond 828 119 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
27584567 27584567 PRJNA561212_P_NODE_21824_length_250_cov_0.881356_g21613_i0 PRJNA561212 21824 250 0.881356 2.20339 Acanthocheilonema viteae 6277 Nematoda Nematoda 54.3 3.38e-6   NR VBB30577.1 6277 g21613 i0 52.2 1.752 46 20 52.8 1 118 249 33 78 VBB30577.1 unnamed protein product [Acanthocheilonema viteae] diamond 438 54.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Acanthocheilonema Acanthocheilonema viteae
28342386 28342386 PRJNA561212_P_NODE_22626_length_248_cov_1.245714_g22415_i0 PRJNA561212 22626 248 1.245714 3.08937072 Meloidogyne enterolobii 390850 Nematoda Nematoda 69.3 2.08e-12   NR CAD2188396.1 390850 g22415 i0 52.1 2.69758064516129 71 31 85.9 1 246 34 99 166 CAD2188396.1 unnamed protein product [Meloidogyne enterolobii] diamond 669 69.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne enterolobii
28437244 28437244 PRJNA561212_P_NODE_18786_length_262_cov_1.560847_g18575_i0 PRJNA561212 18786 262 1.560847 4.08941914 Heterodera trifolii 157864 Nematoda Nematoda 56.2 8.01e-7   NR KAL3072069.1 157864 g18575 i0 35.1 3.41221374045802 74 39 84.7 1 228 7 65 129 KAL3072069.1 hypothetical protein niasHT_036563 [Heterodera trifolii] diamond 894 56.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
28468895 28468895 PRJNA561212_P_NODE_6326_length_438_cov_1.150685_g6115_i0 PRJNA561212 6326 438 1.150685 5.0400003 Thelazia callipaeda 103827 Nematoda Nematoda 76.6 4.3e-13   NR VDN03711.1 103827 g6115 i0 45.6 0.541095890410959 79 41 54.1 1 11 247 77 153 VDN03711.1 unnamed protein product [Thelazia callipaeda] diamond 237 76.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Thelaziidae Thelazia Thelazia callipaeda
29195061 29195061 PRJNA561212_P_NODE_23129_length_247_cov_0.896552_g22918_i0 PRJNA561212 23129 247 0.896552 2.21448344 Caenorhabditis elegans 6239 Nematoda Nematoda 64.3 7.07e-10   NR NP_493904.1 6239 g22918 i0 59.2 3.48582995951417 49 20 59.5 0 80 226 88 136 NP_493904.1 Peptidase C1A papain C-terminal domain-containing protein [Caenorhabditis elegans] diamond 861 64.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
29352876 29352876 PRJNA561212_P_NODE_24529_length_245_cov_0.901163_g24318_i0 PRJNA561212 24529 245 0.901163 2.20784935 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 43.1 0.0288   NR KAE9550892.1 2598192 g24318 i0 41.1 0.685714285714286 56 23 57.6 2 50 190 992 1046 KAE9550892.1 hypothetical protein FO519_005895 [Halicephalobus sp. NKZ332] diamond 168 43.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
30078952 30078952 PRJNA561212_P_NODE_20972_length_252_cov_0.871508_g20761_i0 PRJNA561212 20972 252 0.871508 2.19620016 Aphelenchoides fujianensis 1052528 Nematoda Nematoda 43.9 0.00418   NR KAI6234246.1 1052528 g20761 i0 40.4 1.25 52 31 61.9 0 239 84 33 84 KAI6234246.1 Complex III subunit 9 [Aphelenchoides fujianensis] diamond 315 43.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides fujianensis
31072556 31072556 PRJNA561212_P_NODE_14915_length_291_cov_1.036697_g14704_i0 PRJNA561212 14915 291 1.036697 3.01678827 Rhabditida 6236 Nematoda Nematoda 63.9 1.97e-9   NR TMS36447.1 34508 g14704 i0 42.9 2.83505154639175 91 47 92.8 4 276 7 38 124 TMS36447.1 hypothetical protein L596_003606 [Steinernema carpocapsae] diamond 825 63.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
31343096 31343096 PRJNA561212_P_NODE_18856_length_262_cov_1.190476_g18645_i0 PRJNA561212 18856 262 1.190476 3.11904712 Heterodera trifolii 157864 Nematoda Nematoda 57.4 3.23e-7   NR KAL3112654.1 157864 g18645 i0 41 0.950381679389313 83 39 90.5 3 20 256 396 472 KAL3112654.1 hypothetical protein niasHT_013690 [Heterodera trifolii] diamond 249 57.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
31768087 31768087 PRJNA561212_P_NODE_8817_length_370_cov_1.319865_g8606_i0 PRJNA561212 8817 370 1.319865 4.8835005 Rhabditida 6236 Nematoda Nematoda 104 2.659999999999999e-23   NR KHJ86073.1 61180 g8606 i0 50.9 3.77027027027027 116 52 94.1 2 360 13 308 418 KHJ86073.1 coatomer gamma subunit appendage domain protein [Oesophagostomum dentatum] diamond 1395 105 0.990476190476191 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Oesophagostomum Oesophagostomum dentatum
31831227 31831227 PRJNA561212_P_NODE_15397_length_287_cov_1.233645_g15186_i0 PRJNA561212 15397 287 1.233645 3.54056115 Rhabditida 6236 Nematoda Nematoda 52.4 2.44e-5   NR VDN04265.1 103827 g15186 i0 42.3 3.41811846689895 52 30 54.4 0 119 274 29 80 VDN04265.1 unnamed protein product [Thelazia callipaeda] diamond 981 52.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Thelaziidae Thelazia Thelazia callipaeda
32324077 32324077 PRJNA561212_P_NODE_16539_length_279_cov_0.868932_g16328_i0 PRJNA561212 16539 279 0.868932 2.42432028 Ancylostoma caninum 29170 Nematoda Nematoda 49.7 1.68e-4   NR RCN30196.1 29170 g16328 i0 38.2 0.591397849462366 55 20 44.1 1 10 132 48 102 RCN30196.1 shTK domain protein [Ancylostoma caninum] diamond 165 49.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
32684993 32684993 PRJNA561212_P_NODE_14800_length_292_cov_0.986301_g14589_i0 PRJNA561212 14800 292 0.986301 2.87999892 Opisthokonta 33154 Nematoda Nematoda 84.7 1.23e-16   NR XGW13386.1 6289 g14589 i0 42.2 7.57191780821918 90 52 92.5 0 1 270 574 663 XGW13386.1 hypothetical protein V3C99_000035 [Haemonchus contortus] diamond 2211 85.1 0.995299647473561 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Haemonchus Haemonchus contortus
32842477 32842477 PRJNA561212_P_NODE_9980_length_349_cov_1.500000_g9769_i0 PRJNA561212 9980 349 1.5 5.235 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 47.4 0.00308   NR VDD86101.1 51028 g9769 i0 32.7 2.40687679083095 107 59 83.4 4 16 306 682 785 VDD86101.1 unnamed protein product [Enterobius vermicularis] diamond 840 47.8 0.99163179916318 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Oxyuridae Enterobius Enterobius vermicularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;