RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA561212", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA561212 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12024335 12024335 PRJNA561212_P_NODE_1170_length_994_cov_3.837134_g1011_i0 PRJNA561212 1170 994 3.837134 38.14111196 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 75 2.15e-8   NTclustered gi|448278458|gb|KC137554.1| 1289055 g1011 i0 95.652 0.51307847082495 46 2 5 0 187 232 2962 2917 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 510 75 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
31311320 31311320 PRJNA561212_P_NODE_17835_length_269_cov_1.372449_g17624_i0 PRJNA561212 17835 269 1.372449 3.69188781 Hamiltosporidium magnivora 148818 Fungi Fungi 47 0.00156   NR TBT98942.1 148818 g17624 i0 37 1.02602230483271 46 28 51.3 1 163 26 6 50 TBT98942.1 Myb-like DNA-binding domain-containing protein [Hamiltosporidium magnivora] diamond 276 47 1 Eukaryota Opisthokonta Fungi Microsporidia     Dubosqiidae Hamiltosporidium Hamiltosporidium magnivora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;