contig_metadata
2 rows where bioproject = "PRJNA561212", tax_clade = "delta/epsilon subdivisions" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28829809 | 28829809 | PRJNA561212_P_NODE_7488_length_401_cov_1.804878_g7277_i0 | PRJNA561212 | 7488 | 401 | 1.804878 | 7.23756078 | Bacteria | 2 | Bacteria | Bacteria | 50.1 | 5.31e-4 | NR | WP_111335328.1 | 1548548 | g7277 | i0 | 56.8 | 0.830423940149626 | 37 | 16 | 27.7 | 0 | 267 | 377 | 125 | 161 | WP_111335328.1 RCC1 domain-containing protein [Bradymonas sediminis] | diamond | 333 | 50.4 | 0.994047619047619 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis | |||
| 31216126 | 31216126 | PRJNA561212_P_NODE_23755_length_246_cov_0.901734_g23544_i0 | PRJNA561212 | 23755 | 246 | 0.901734 | 2.21826564 | Bradymonas sediminis | 1548548 | Bacteria | Bacteria | 69.3 | 8.53e-12 | NR | WP_111332469.1 | 1548548 | g23544 | i0 | 54.7 | 0.914634146341463 | 75 | 30 | 87.8 | 2 | 14 | 229 | 192 | 265 | WP_111332469.1 SIR2 family NAD-dependent protein deacylase [Bradymonas sediminis] | diamond | 225 | 69.3 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Bradymonadaceae | Bradymonas | Bradymonas sediminis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;