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contig_metadata

13 rows where bioproject = "PRJNA561212", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 13 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 13 ✖

bioproject 1

  • PRJNA561212 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6923628 6923628 PRJNA561212_P_NODE_9766_length_353_cov_1.125000_g9555_i0 PRJNA561212 9766 353 1.125 3.97125 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 344 4.92e-90   NTclustered gi|2874253779|emb|OY969763.1| 412056 g9555 i0 85.671 75.371104815864 328 45 93 2 18 344 3832605 3832279 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 blastn 26606 344 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
8198302 8198302 PRJNA561212_P_NODE_21207_length_251_cov_0.876404_g20996_i0 PRJNA561212 21207 251 0.876404 2.19977404 Fontisphaera persica 2974023 Bacteria Bacteria 359 1.2e-94   NTclustered gi|2439237958|gb|CP116615.1| 2974023 g20996 i0 94.421 140.247011952191 233 13 93 0 12 244 3863253 3863485 Fontisphaera persica strain B-154 chromosome, complete genome blastn 35202 359 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Limisphaerales Fontisphaeraceae Fontisphaera Fontisphaera persica
15848122 15848122 PRJNA561212_P_NODE_12753_length_312_cov_1.230126_g12542_i0 PRJNA561212 12753 312 1.230126 3.83799312 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 359 1.5299999999999998e-94   NTclustered gi|2874253690|emb|OY969416.1| 412056 g12542 i0 88.667 26.1185897435897 300 27 95 6 10 304 1316380 1316677 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 blastn 8149 359 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
16433400 16433400 PRJNA561212_P_NODE_8373_length_379_cov_1.986928_g8162_i0 PRJNA561212 8373 379 1.986928 7.53045712 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 111 1.13e-26   NR HXJ60019.1 2499141 g8162 i0 65.2 6.35620052770449 89 30 70.4 1 12 278 231 318 HXJ60019.1 transaldolase [Verrucomicrobiia bacterium] diamond 2409 111 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
20947746 20947746 PRJNA561212_P_NODE_9997_length_349_cov_1.094203_g9786_i0 PRJNA561212 9997 349 1.094203 3.81876847 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 536 7.459999999999997e-148   NTclustered gi|2874253690|emb|OY969416.1| 412056 g9786 i0 95.015 257.819484240688 341 17 98 0 9 349 1315691 1316031 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 blastn 89979 536 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
22222538 22222538 PRJNA561212_P_NODE_3778_length_568_cov_2.135354_g3571_i0 PRJNA561212 3778 568 2.135354 12.12881072 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 678 0   NTclustered gi|2874253690|emb|OY969416.1| 412056 g3571 i0 88.969 217.588028169014 553 56 97 3 9 560 1314951 1315499 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 blastn 123590 678 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
27141927 27141927 PRJNA561212_P_NODE_16222_length_281_cov_1.043269_g16011_i0 PRJNA561212 16222 281 1.043269 2.93158589 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 51.6 4.26e-5   NR MBV9490222.1 2026799 g16011 i0 50 2.11387900355872 42 21 44.8 0 274 149 4 45 MBV9490222.1 WD40 repeat domain-containing protein [Verrucomicrobiota bacterium] diamond 594 51.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28089717 28089717 PRJNA561212_P_NODE_17365_length_272_cov_2.783920_g17154_i0 PRJNA561212 17365 272 2.78392 7.5722624 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 43.5 0.0287   NR HOB97342.1 2026799 g17154 i0 30.9 0.893382352941177 81 56 89.3 0 254 12 187 267 HOB97342.1 glycoside hydrolase family 127 protein [Verrucomicrobiota bacterium] diamond 243 43.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29226719 29226719 PRJNA561212_P_NODE_9269_length_362_cov_0.809689_g9058_i0 PRJNA561212 9269 362 0.809689 2.93107418 Puniceicoccaceae bacterium K14 2922731 Bacteria Bacteria 125 9.52e-31   NR MCH6258034.1 2922731 g9058 i0 59.8 0.969613259668508 117 38 97 2 362 12 390 497 MCH6258034.1 allophanate hydrolase [Puniceicoccaceae bacterium K14] diamond 351 125 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Puniceicoccaceae   Puniceicoccaceae bacterium K14
31564725 31564725 PRJNA561212_P_NODE_7636_length_397_cov_1.407407_g7425_i0 PRJNA561212 7636 397 1.407407 5.58740579 Candidatus Methylacidiphilales bacterium 2720631 Bacteria Bacteria 100 5.319999999999999e-23   NR MCE0499624.1 2720631 g7425 i0 51.5 0.778337531486146 103 32 77.8 2 312 4 45 129 MCE0499624.1 superoxide dismutase [Candidatus Methylacidiphilales bacterium] diamond 309 100 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Methylacidiphilae Methylacidiphilales     Candidatus Methylacidiphilales bacterium
31659161 31659161 PRJNA561212_P_NODE_20377_length_253_cov_0.866667_g20166_i0 PRJNA561212 20377 253 0.866667 2.19266751 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 76.6 4.82e-14   NR MBS0645922.1 2026799 g20166 i0 50.7 2.66798418972332 75 36 87.7 1 233 12 846 920 MBS0645922.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 675 76.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31785682 31785682 PRJNA561212_P_NODE_22837_length_248_cov_0.891429_g22626_i0 PRJNA561212 22837 248 0.891429 2.21074392 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 73.6 5.21e-13   NR MBO34746.1 2026801 g22626 i0 69.6 0.556451612903226 46 14 55.6 0 237 100 394 439 MBO34746.1 3-deoxy-7-phosphoheptulonate synthase class II [Verrucomicrobiales bacterium] diamond 138 73.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
32306339 32306339 PRJNA561212_P_NODE_23299_length_247_cov_0.896552_g23088_i0 PRJNA561212 23299 247 0.896552 2.21448344 Bacteria 2 Bacteria Bacteria 58.2 1.42e-7   NR MFU8848897.1 2026772 g23088 i0 45.8 4.91902834008097 72 36 87.4 1 218 3 666 734 MFU8848897.1 DEAD/DEAH box helicase [Opitutales bacterium] diamond 1215 58.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;