RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where bioproject = "PRJNA561212" and tax_clade = "Metamonada"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 18 ✖

bioproject 1

  • PRJNA561212 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5649250 5649250 PRJNA561212_P_NODE_24065_length_245_cov_1.720930_g23854_i0 PRJNA561212 24065 245 1.72093 4.2162785 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.7 0.006   NTclustered gi|2806459960|ref|XM_068504050.1| 1144522 g23854 i0 94.444 0.261224489795918 36 1 15 1 49 84 1751 1785 Tritrichomonas foetus uncharacterized protein (TRFO_24971), partial mRNA blastn 64 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27079092 27079092 PRJNA561212_P_NODE_23342_length_247_cov_0.896552_g23131_i0 PRJNA561212 23342 247 0.896552 2.21448344 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 60.5 8.72e-9   NR KAJ4455450.1 342808 g23131 i0 47.5 0.716599190283401 59 29 71.7 1 226 50 110 166 KAJ4455450.1 putative emopamil-binding protein [Paratrimastix pyriformis] diamond 177 60.5 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
27300386 27300386 PRJNA561212_P_NODE_24343_length_245_cov_0.906977_g24132_i0 PRJNA561212 24343 245 0.906977 2.22209365 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 103 6.73e-25   NR KAJ3449621.1 1746091 g24132 i0 59 1.01632653061224 83 29 95.5 2 4 237 1 83 KAJ3449621.1 hypothetical protein M0812_05776 [Anaeramoeba flamelloides] diamond 249 103 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
27900151 27900151 PRJNA561212_P_NODE_1205_length_981_cov_2.477974_g1042_i0 PRJNA561212 1205 981 2.477974 24.30892494 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 60.5 6.92e-6   NR KAJ4462339.1 342808 g1042 i0 30.7 0.63302752293578 140 77 40.4 7 417 22 2928 3055 KAJ4462339.1 putative tenascin precursor [Paratrimastix pyriformis] diamond 621 60.5 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
28215845 28215845 PRJNA561212_P_NODE_20486_length_253_cov_0.866667_g20275_i0 PRJNA561212 20486 253 0.866667 2.19266751 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 56.6 5.62e-7   NR KAJ5080207.1 1746090 g20275 i0 33.8 0.91304347826087 77 51 91.3 0 17 247 967 1043 KAJ5080207.1 spectrin beta chain [Anaeramoeba ignava] diamond 231 56.6 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
29051104 29051104 PRJNA561212_P_NODE_18308_length_266_cov_0.948187_g18097_i0 PRJNA561212 18308 266 0.948187 2.52217742 root 1 Root_unresolved Root_unresolved 47.8 8.38e-4   NR KAJ5067765.1 1746090 g18097 i0 35.5 2.17669172932331 62 40 69.9 0 188 3 289 350 KAJ5067765.1 claret isoform a [Anaeramoeba ignava] diamond 579 47.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
29289523 29289523 PRJNA561212_P_NODE_11289_length_330_cov_0.875486_g11078_i0 PRJNA561212 11289 330 0.875486 2.8891038 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 49.3 4.69e-4   NR XP_001323917.1 412133 g11078 i0 50 0.4 44 21 39.1 1 319 191 224 267 XP_001323917.1 protein serine/threonine kinase protein [Trichomonas vaginalis G3] diamond 132 49.3 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29415795 29415795 PRJNA561212_P_NODE_1709_length_828_cov_1.459603_g1522_i0 PRJNA561212 1709 828 1.459603 12.08551284 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 54.3 3.13e-4   NR KAJ4454930.1 342808 g1522 i0 23 0.804347826086957 222 164 79.3 3 695 39 425 642 KAJ4454930.1 putative Ectonucleoside triphosphate diphosphohydrolase 3 [Paratrimastix pyriformis] diamond 666 54.3 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29478778 29478778 PRJNA561212_P_NODE_18870_length_262_cov_1.148148_g18659_i0 PRJNA561212 18870 262 1.148148 3.00814776 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 59.7 1.06e-8   NR XP_067730312.1 2049356 g18659 i0 56.6 0.606870229007634 53 22 59.5 1 260 105 114 166 XP_067730312.1 putative translationally controlled tumor protein [Monocercomonoides exilis] diamond 159 59.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
29921314 29921314 PRJNA561212_P_NODE_11411_length_328_cov_1.301961_g11200_i0 PRJNA561212 11411 328 1.301961 4.27043208 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 74.3 4.12e-13   NR KAJ4458596.1 342808 g11200 i0 41.4 0.795731707317073 87 51 79.6 0 46 306 211 297 KAJ4458596.1 hypothetical protein PAPYR_5562 [Paratrimastix pyriformis] diamond 261 74.3 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
30300714 30300714 PRJNA561212_P_NODE_24272_length_245_cov_0.906977_g24061_i0 PRJNA561212 24272 245 0.906977 2.22209365 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 45.8 0.00321   NR KAJ5079296.1 1746090 g24061 i0 33.3 0.881632653061225 72 48 88.2 0 22 237 1419 1490 KAJ5079296.1 leucine-rich repeat isoform f [Anaeramoeba ignava] diamond 216 45.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
30300719 30300719 PRJNA561212_P_NODE_3812_length_567_cov_0.933198_g3605_i0 PRJNA561212 3812 567 0.933198 5.29123266 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 52.8 2.78e-4   NR KAJ3449463.1 1746091 g3605 i0 42 0.428571428571429 81 43 41.8 2 11 247 221 299 KAJ3449463.1 structural maintenance of chromosomes protein [Anaeramoeba flamelloides] diamond 243 52.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
30332361 30332361 PRJNA561212_P_NODE_24292_length_245_cov_0.906977_g24081_i0 PRJNA561212 24292 245 0.906977 2.22209365 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 72.4 6.3e-13   NR KAJ3442779.1 1746091 g24081 i0 41.3 0.918367346938776 75 44 91.8 0 235 11 167 241 KAJ3442779.1 hypothetical protein M0812_12525 [Anaeramoeba flamelloides] diamond 225 72.4 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
31121372 31121372 PRJNA561212_P_NODE_16435_length_279_cov_1.587379_g16224_i0 PRJNA561212 16435 279 1.587379 4.42878741 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 47.8 9.53e-5   NR XP_001579255.1 412133 g16224 i0 50 0.494623655913978 46 20 49.5 1 98 235 4 46 XP_001579255.1 associate of C-MYC AMY-1 family [Trichomonas vaginalis G3] diamond 138 47.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31248143 31248143 PRJNA561212_P_NODE_22415_length_249_cov_0.886364_g22204_i0 PRJNA561212 22415 249 0.886364 2.20704636 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 72.4 1.49e-12   NR KAJ5076917.1 1746090 g22204 i0 44.4 2.75903614457831 81 45 97.6 0 1 243 837 917 KAJ5076917.1 alpha-actinin-2 [Anaeramoeba ignava] diamond 687 72.4 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
31343097 31343097 PRJNA561212_P_NODE_19116_length_260_cov_1.534759_g18905_i0 PRJNA561212 19116 260 1.534759 3.9903734 Kipferlia bialata 797122 Fornicata other_Eukaryota 71.6 2.02e-12   NR GCA62811.1 797122 g18905 i0 48.2 0.980769230769231 85 39 94.6 3 251 6 185 267 GCA62811.1 phytanoyl-CoA dioxygenase [Kipferlia bialata] diamond 255 71.6 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
32513898 32513898 PRJNA561212_P_NODE_3199_length_616_cov_2.116022_g2994_i0 PRJNA561212 3199 616 2.116022 13.03469552 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 228 2.63e-69   NR KAJ5067249.1 1746090 g2994 i0 54 0.983766233766234 202 92 97.9 1 609 7 205 406 KAJ5067249.1 coronin [Anaeramoeba ignava] diamond 606 228 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
32891542 32891542 PRJNA561212_P_NODE_23280_length_247_cov_0.896552_g23069_i0 PRJNA561212 23280 247 0.896552 2.21448344 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 43.5 0.00741   NR KAJ6239185.1 1746091 g23069 i0 34.7 0.910931174089069 75 40 91.1 2 11 235 13 78 KAJ6239185.1 sorting nexin-13 [Anaeramoeba flamelloides] diamond 225 43.5 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;