RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA561212", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA561212 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13299484 13299484 PRJNA561212_P_NODE_21251_length_251_cov_0.876404_g21040_i0 PRJNA561212 21251 251 0.876404 2.19977404 Fidelibacterota bacterium 2026760 Bacteria Bacteria 119 7.97e-30   NR MCK4579175.1 2026760 g21040 i0 62.5 3.83665338645418 80 28 93.2 1 11 244 78 157 MCK4579175.1 alkaline phosphatase family protein [Fidelibacterota bacterium] diamond 963 119 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
26699076 26699076 PRJNA561212_P_NODE_4841_length_503_cov_1.351163_g4631_i0 PRJNA561212 4841 503 1.351163 6.79634989 Fidelibacterota bacterium 2026760 Bacteria Bacteria 58.5 1.56e-6   NR MBT4068219.1 2026760 g4631 i0 63.6 0.262425447316103 44 16 26.2 0 39 170 396 439 MBT4068219.1 hypothetical protein [Fidelibacterota bacterium] diamond 132 58.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29857892 29857892 PRJNA561212_P_NODE_12951_length_310_cov_1.156118_g12740_i0 PRJNA561212 12951 310 1.156118 3.5839658 Fidelibacterota bacterium 2026760 Bacteria Bacteria 45.1 0.00534   NR MCH8069122.1 2026760 g12740 i0 35.5 0.6 62 36 56.1 2 281 108 3 64 MCH8069122.1 cyclic nucleotide-binding domain-containing protein [Fidelibacterota bacterium] diamond 186 45.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32355634 32355634 PRJNA561212_P_NODE_7659_length_397_cov_0.861111_g7448_i0 PRJNA561212 7659 397 0.861111 3.41861067 Fidelibacterota bacterium 2026760 Bacteria Bacteria 45.4 0.0172   NR NQU27575.1 2026760 g7448 i0 39.7 0.82367758186398 58 26 43.8 1 201 374 4 52 NQU27575.1 alpha/beta hydrolase [Fidelibacterota bacterium] diamond 327 45.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;