RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA561212", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA561212 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22222620 22222620 PRJNA561212_P_NODE_8098_length_385_cov_2.269231_g7887_i0 PRJNA561212 8098 385 2.269231 8.73653935 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 422 2.43e-113   NTclustered gi|1869359902|gb|CP058732.1| 2447898 g7887 i0 87.5 299.61038961039 368 43 95 2 10 376 421112 421477 MAG: Candidatus Kapaibacterium sp. isolate Ch6 chromosome, complete genome blastn 115350 422 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
32765650 32765650 PRJNA561212_P_NODE_7220_length_409_cov_0.937500_g7009_i0 PRJNA561212 7220 409 0.9375 3.834375 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 82 2e-15   NR MCS6965565.1 2447898 g7009 i0 54.8 0.535452322738386 73 32 53.5 1 232 14 21 92 MCS6965565.1 zinc-binding dehydrogenase [Candidatus Kapaibacterium sp.] diamond 219 82 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;