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contig_metadata

4 rows where bioproject = "PRJNA561212", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA561212 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26730493 26730493 PRJNA561212_P_NODE_17701_length_270_cov_1.446701_g17490_i0 PRJNA561212 17701 270 1.446701 3.9060927 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 87 1.34e-17   NR RMD63071.1 2762014 g17490 i0 50 1.87777777777778 84 40 93.3 2 8 259 260 341 RMD63071.1 MAG: hypothetical protein D6833_06050, partial [Candidatus Parcubacteria bacterium] diamond 507 87 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29289524 29289524 PRJNA561212_P_NODE_12369_length_316_cov_1.493827_g12158_i0 PRJNA561212 12369 316 1.493827 4.72049332 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 100 4.47e-22   NR RMD63071.1 2762014 g12158 i0 47.1 0.987341772151899 104 50 95.9 2 6 308 378 479 RMD63071.1 MAG: hypothetical protein D6833_06050, partial [Candidatus Parcubacteria bacterium] diamond 312 100 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30756556 30756556 PRJNA561212_P_NODE_17794_length_269_cov_1.974490_g17583_i0 PRJNA561212 17794 269 1.97449 5.3113781 Pseudomonadati 3379134 Bacteria Bacteria 68.9 3.06e-11   NR RMD63071.1 2762014 g17583 i0 47.1 3.01115241635688 70 35 78.1 1 51 260 296 363 RMD63071.1 MAG: hypothetical protein D6833_06050, partial [Candidatus Parcubacteria bacterium] diamond 810 69.3 0.994227994227994 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
31627659 31627659 PRJNA561212_P_NODE_6176_length_444_cov_1.212938_g5965_i0 PRJNA561212 6176 444 1.212938 5.38544472 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 90.9 5.01e-18   NR RMD63071.1 2762014 g5965 i0 41.1 0.722972972972973 107 55 69.6 2 364 56 311 413 RMD63071.1 MAG: hypothetical protein D6833_06050, partial [Candidatus Parcubacteria bacterium] diamond 321 90.9 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;