contig_metadata
17 rows where bioproject = "PRJNA561138", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4372404 | 4372404 | PRJNA561138_P_NODE_11424_length_383_cov_0.993548_g11229_i0 | PRJNA561138 | 11424 | 383 | 0.993548 | 3.80528884 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 185 | 1.4e-52 | NR | MDH3211932.1 | 2026763 | g11229 | i0 | 66.1 | 0.994778067885117 | 127 | 43 | 99.5 | 0 | 2 | 382 | 63 | 189 | MDH3211932.1 C-mannosyltransferase dpy-19 family protein [Myxococcales bacterium] | diamond | 381 | 185 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 6922983 | 6922983 | PRJNA561138_P_NODE_14766_length_341_cov_1.149254_g14571_i0 | PRJNA561138 | 14766 | 341 | 1.149254 | 3.91895614 | Polyangium aurulentum | 2567896 | Bacteria | Bacteria | 143 | 1.86e-29 | NTclustered | gi|2235996827|gb|CP079217.1| | 2567896 | g14571 | i0 | 79.703 | 40.7595307917889 | 202 | 37 | 59 | 2 | 23 | 222 | 1536942 | 1537141 | Polyangium aurulentum strain SDU3-1 chromosome, complete genome | blastn | 13899 | 143 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | Polyangium aurulentum | |||
| 13298987 | 13298987 | PRJNA561138_P_NODE_10491_length_397_cov_0.950617_g10296_i0 | PRJNA561138 | 10491 | 397 | 0.950617 | 3.77394949 | Bacteria | 2 | Bacteria | Bacteria | 132 | 3.12e-34 | NR | MBW2191099.1 | 2026735 | g10296 | i0 | 74.1 | 4.89672544080604 | 81 | 21 | 61.2 | 0 | 391 | 149 | 273 | 353 | MBW2191099.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 1944 | 132 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 13299248 | 13299248 | PRJNA561138_P_NODE_5011_length_553_cov_1.122917_g4820_i0 | PRJNA561138 | 5011 | 553 | 1.122917 | 6.20973101 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 278 | 7.84e-89 | NR | MBW1749655.1 | 2026735 | g4820 | i0 | 69.4 | 4.96383363471971 | 183 | 56 | 99.3 | 0 | 3 | 551 | 164 | 346 | MBW1749655.1 DUF1254 domain-containing protein [Deltaproteobacteria bacterium] | diamond | 2745 | 278 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 18397006 | 18397006 | PRJNA561138_P_NODE_27015_length_247_cov_0.885057_g26820_i0 | PRJNA561138 | 27015 | 247 | 0.885057 | 2.18609079 | Anaeromyxobacter oryzae | 2918170 | Bacteria | Bacteria | 169 | 2.1199999999999996e-37 | NTclustered | gi|2199265233|dbj|AP025591.1| | 2918170 | g26820 | i0 | 79.752 | 73.5587044534413 | 242 | 41 | 96 | 7 | 4 | 241 | 438030 | 438267 | Anaeromyxobacter oryzae DNA, complete genome | blastn | 18169 | 169 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter oryzae | ||
| 20947181 | 20947181 | PRJNA561138_P_NODE_17057_length_317_cov_1.057377_g16862_i0 | PRJNA561138 | 17057 | 317 | 1.057377 | 3.35188509 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 52.8 | 0.03 | NTclustered | gi|2108253172|gb|CP070689.1| | 2026735 | g16862 | i0 | 100 | 0.0883280757097792 | 28 | 0 | 9 | 0 | 123 | 150 | 119126 | 119153 | MAG: Deltaproteobacteria bacterium isolate bin63 chromosome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 23497304 | 23497304 | PRJNA561138_P_NODE_11519_length_382_cov_0.974110_g11324_i0 | PRJNA561138 | 11519 | 382 | 0.97411 | 3.7211002 | Minicystis rosea | 888845 | Bacteria | Bacteria | 193 | 2.06e-44 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g11324 | i0 | 77.049 | 20.5157068062827 | 366 | 64 | 93 | 17 | 18 | 373 | 9964998 | 9965353 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 7837 | 193 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 27047493 | 27047493 | PRJNA561138_P_NODE_10762_length_392_cov_1.448276_g10567_i0 | PRJNA561138 | 10762 | 392 | 1.448276 | 5.67724192 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 93.6 | 1.33e-20 | NR | MEE9282273.1 | 2818507 | g10567 | i0 | 41.1 | 1.66071428571429 | 107 | 62 | 81.1 | 1 | 320 | 3 | 4 | 110 | MEE9282273.1 helix-turn-helix domain-containing protein [Myxococcota bacterium] | diamond | 651 | 93.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 30110624 | 30110624 | PRJNA561138_P_NODE_15752_length_331_cov_0.895349_g15557_i0 | PRJNA561138 | 15752 | 331 | 0.895349 | 2.96360519 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 51.6 | 9.57e-6 | NR | MBX2796124.1 | 2026763 | g15557 | i0 | 39.4 | 2.09365558912387 | 71 | 42 | 63.4 | 1 | 122 | 331 | 6 | 76 | MBX2796124.1 hypothetical protein [Myxococcales bacterium] | diamond | 693 | 51.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 30110627 | 30110627 | PRJNA561138_P_NODE_9092_length_419_cov_1.231214_g8897_i0 | PRJNA561138 | 9092 | 419 | 1.231214 | 5.15878666 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 165 | 2.75e-44 | NR | MBW2370958.1 | 2026735 | g8897 | i0 | 56.5 | 1.97613365155131 | 138 | 60 | 98.8 | 0 | 4 | 417 | 776 | 913 | MBW2370958.1 PD-(D/E)XK nuclease family protein [Deltaproteobacteria bacterium] | diamond | 828 | 165 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30187712 | 30187712 | PRJNA561138_P_NODE_9412_length_413_cov_1.358824_g9217_i0 | PRJNA561138 | 9412 | 413 | 1.358824 | 5.61194312 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 136 | 4.97e-36 | NR | MBW2393997.1 | 2026735 | g9217 | i0 | 43.8 | 2.95641646489104 | 137 | 75 | 99.5 | 1 | 1 | 411 | 58 | 192 | MBW2393997.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 1221 | 137 | 0.992700729927007 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30932198 | 30932198 | PRJNA561138_P_NODE_13034_length_362_cov_1.332180_g12839_i0 | PRJNA561138 | 13034 | 362 | 1.33218 | 4.8224916 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 229 | 1.28e-70 | NR | MFT5684629.1 | 2818507 | g12839 | i0 | 95 | 3.97790055248619 | 120 | 6 | 99.4 | 0 | 3 | 362 | 85 | 204 | MFT5684629.1 sodium/proline symporter [Myxococcota bacterium] | diamond | 1440 | 229 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 31248125 | 31248125 | PRJNA561138_P_NODE_29675_length_242_cov_0.899408_g29480_i0 | PRJNA561138 | 29675 | 242 | 0.899408 | 2.17656736 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 91.3 | 3.35e-20 | NR | MEM1009483.1 | 2818507 | g29480 | i0 | 54.5 | 0.954545454545455 | 77 | 31 | 95.5 | 1 | 8 | 238 | 89 | 161 | MEM1009483.1 hypothetical protein [Myxococcota bacterium] | diamond | 231 | 91.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 31627636 | 31627636 | PRJNA561138_P_NODE_29476_length_242_cov_0.911243_g29281_i0 | PRJNA561138 | 29476 | 242 | 0.911243 | 2.20520806 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 54.7 | 2.11e-7 | NR | MFO0665196.1 | 2268199 | g29281 | i0 | 75 | 1.35123966942149 | 36 | 9 | 44.6 | 0 | 1 | 108 | 67 | 102 | MFO0665196.1 tetratricopeptide repeat protein [Polyangiaceae bacterium] | diamond | 327 | 54.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 32102221 | 32102221 | PRJNA561138_P_NODE_8078_length_440_cov_0.831063_g7883_i0 | PRJNA561138 | 8078 | 440 | 0.831063 | 3.6566772 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 175 | 9.729999999999999e-53 | NR | MCB9521737.1 | 2026763 | g7883 | i0 | 75.7 | 0.756818181818182 | 111 | 27 | 75.7 | 0 | 108 | 440 | 1 | 111 | MCB9521737.1 TetR/AcrR family transcriptional regulator [Myxococcales bacterium] | diamond | 333 | 175 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 32243051 | 32243051 | PRJNA561138_P_NODE_14518_length_344_cov_1.114391_g14323_i0 | PRJNA561138 | 14518 | 344 | 1.114391 | 3.83350504 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 182 | 1.66e-52 | NR | MCA9638316.1 | 2026763 | g14323 | i0 | 78.9 | 3.88953488372093 | 114 | 24 | 99.4 | 0 | 344 | 3 | 257 | 370 | MCA9638316.1 SulP family inorganic anion transporter [Myxococcales bacterium] | diamond | 1338 | 182 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 32545453 | 32545453 | PRJNA561138_P_NODE_17479_length_313_cov_0.962500_g17284_i0 | PRJNA561138 | 17479 | 313 | 0.9625 | 3.012625 | Myxococcus sp. | 1929279 | Bacteria | Bacteria | 50.1 | 2.27e-4 | NR | HZI16333.1 | 1929279 | g17284 | i0 | 33.7 | 0.996805111821086 | 104 | 66 | 98.7 | 3 | 2 | 310 | 327 | 428 | HZI16333.1 peptidoglycan DD-metalloendopeptidase family protein [Myxococcus sp.] | diamond | 312 | 50.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;