RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA561138", tax_kingdom = "Fungi" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA561138 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5648949 5648949 PRJNA561138_P_NODE_27425_length_246_cov_0.890173_g27230_i0 PRJNA561138 27425 246 0.890173 2.18982558 Aspergillus sydowii 75750 Fungi Fungi 261 3.39e-65   NTclustered gi|2028175029|ref|XM_040851741.1| 1036612 g27230 i0 100 1.09349593495935 141 0 57 0 106 246 1215 1075 Aspergillus sydowii CBS 593.65 uncharacterized protein (ASPSYDRAFT_86882), partial mRNA blastn 269 261 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus sydowii
16433308 16433308 PRJNA561138_P_NODE_16173_length_326_cov_1.513834_g15978_i0 PRJNA561138 16173 326 1.513834 4.93509884 Opisthokonta 33154 Fungi Fungi 603 6.749999999999998e-168   NTclustered gi|325484983|gb|HQ407432.1| 5061 g15978 i0 100 99.8895705521472 326 0 100 0 1 326 668 343 Aspergillus niger strain B1.Eg mitochondrial citrate synthase precursor, gene, partial cds; nuclear gene for mitochondrial product blastn 32564 603 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;