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contig_metadata

31 rows where bioproject = "PRJNA560932" and tax_phylum = "Thermodesulfobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 31 ✖

tax_kingdom 1

bioproject 1

  • PRJNA560932 · 31 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10749116 10749116 PRJNA560932_P_NODE_53689_length_250_cov_0.870056_g53333_i0 PRJNA560932 53689 250 0.870056 2.17514 Pseudomonadati 3379134 Bacteria Bacteria 119 3.16e-30   NR MBA4390228.1 48412 g53333 i0 72.3 7.884 83 23 99.6 0 250 2 212 294 MBA4390228.1 cysteine synthase A [Syntrophus sp. (in: bacteria)] diamond 1971 120 0.991666666666667 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales Syntrophaceae Syntrophus Syntrophus sp. (in: bacteria)
27092977 27092977 PRJNA560932_P_NODE_44982_length_272_cov_2.311558_g44626_i0 PRJNA560932 44982 272 2.311558 6.28743776 FCB group 1783270 Bacteria Bacteria 91.3 4.54e-19   NR WP_205234938.1 468528 g44626 i0 63.3 6.86029411764706 90 25 98.2 5 5 271 586 668 WP_205234938.1 NADPH-dependent 2,4-dienoyl-CoA reductase [Desulfopila inferna] diamond 1866 91.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfocapsaceae Desulfopila Desulfopila inferna
27472324 27472324 PRJNA560932_P_NODE_64463_length_243_cov_0.905882_g64107_i0 PRJNA560932 64463 243 0.905882 2.20129326 Pseudomonadati 3379134 Bacteria Bacteria 123 8.76e-33   NR RUM35362.1 895 g64107 i0 68.4 6.83950617283951 79 25 97.5 0 6 242 148 226 RUM35362.1 MAG: hypothetical protein DSY50_04930 [Desulfobulbus sp.] diamond 1662 124 0.991935483870968 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfobulbus Desulfobulbus sp.
27521338 27521338 PRJNA560932_P_NODE_50243_length_256_cov_1.262295_g49887_i0 PRJNA560932 50243 256 1.262295 3.2314752 uncultured Mailhella sp. 1981031 Bacteria Bacteria 43.1 0.0308   NR WP_298068884.1 1981031 g49887 i0 36.8 0.890625 76 42 86.7 2 16 237 15 86 WP_298068884.1 ABC transporter ATP-binding protein [uncultured Mailhella sp.] diamond 228 43.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Mailhella uncultured Mailhella sp.
27679546 27679546 PRJNA560932_P_NODE_1184_length_1367_cov_2.244977_g1034_i0 PRJNA560932 1184 1367 2.244977 30.68883559 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 130 5.150000000000001e-29   NR MFC1834884.1 2202153 g1034 i0 29.8 0.678127286027798 309 199 65.4 8 1329 436 137 438 MFC1834884.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 927 130 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27725182 27725182 PRJNA560932_P_NODE_33304_length_314_cov_1.448133_g32948_i0 PRJNA560932 33304 314 1.448133 4.54713762 FCB group 1783270 Bacteria Bacteria 68.6 7.11e-11   NR WP_043636645.1 1562888 g32948 i0 45.3 5.25477707006369 64 35 61.1 0 196 5 5 68 WP_043636645.1 DEAD/DEAH box helicase [Desulfovibrio sp. TomC] diamond 1650 68.9 0.995645863570392 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp. TomC
27837042 27837042 PRJNA560932_P_NODE_61164_length_245_cov_0.895349_g60808_i0 PRJNA560932 61164 245 0.895349 2.19360505 Desulfobulbaceae bacterium 2053307 Bacteria Bacteria 44.3 0.00871   NR MBF0222356.1 2053307 g60808 i0 38.7 0.759183673469388 62 34 71 2 244 71 18 79 MBF0222356.1 hypothetical protein [Desulfobulbaceae bacterium] diamond 186 44.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium
28166923 28166923 PRJNA560932_P_NODE_17625_length_419_cov_1.343931_g17269_i0 PRJNA560932 17625 419 1.343931 5.63107089 Desulfobacterales 213118 Bacteria Bacteria 134 3.28e-33   NR WP_207683226.1 45655 g17269 i0 46.9 5.1909307875895 145 70 99.5 2 419 3 118 261 WP_207683226.1 S8 family serine peptidase [Desulfonema magnum] diamond 2175 134 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfococcaceae Desulfonema Desulfonema magnum
28419596 28419596 PRJNA560932_P_NODE_57866_length_247_cov_0.885057_g57510_i0 PRJNA560932 57866 247 0.885057 2.18609079 Desulfobulbales 3024411 Bacteria Bacteria 76.3 5.69e-14   NR KAB2887159.1 2053307 g57510 i0 49.4 2.87854251012146 79 40 96 0 9 245 329 407 KAB2887159.1 MAG: DEAD/DEAH box helicase, partial [Desulfobulbaceae bacterium] diamond 711 77 0.990909090909091 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae   Desulfobulbaceae bacterium
28577270 28577270 PRJNA560932_P_NODE_14647_length_457_cov_13.265625_g14292_i0 PRJNA560932 14647 457 13.265625 60.62390625 Bacteria 2 Bacteria Bacteria 51.6 4.1e-5   NR MEJ2102355.1 2044940 g14292 i0 38.9 1.22757111597374 90 48 59.1 2 439 170 4 86 MEJ2102355.1 DUF86 domain-containing protein [Desulfobacterales bacterium] diamond 561 52 0.992307692307692 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
28689878 28689878 PRJNA560932_P_NODE_54487_length_250_cov_0.870056_g54131_i0 PRJNA560932 54487 250 0.870056 2.17514 Syntrophales bacterium 2928017 Bacteria Bacteria 63.2 1.73e-9   NR HSD94061.1 2928017 g54131 i0 54.9 1.872 51 23 61.2 0 158 6 12 62 HSD94061.1 hypothetical protein [Syntrophales bacterium] diamond 468 63.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophia Syntrophales     Syntrophales bacterium
28721248 28721248 PRJNA560932_P_NODE_13227_length_481_cov_0.791667_g12873_i0 PRJNA560932 13227 481 0.791667 3.80791827 Desulfobacterales bacterium 2044940 Bacteria Bacteria 76.6 6.2e-13   NR MBT9438311.1 2044940 g12873 i0 54.4 0.848232848232848 68 28 42.4 1 481 278 367 431 MBT9438311.1 hypothetical protein [Desulfobacterales bacterium] diamond 408 76.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
29289506 29289506 PRJNA560932_P_NODE_61609_length_245_cov_0.895349_g61253_i0 PRJNA560932 61609 245 0.895349 2.19360505 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 81.6 7.59e-16   NR HAO22905.1 2049433 g61253 i0 42.5 0.979591836734694 80 46 98 0 1 240 290 369 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 240 81.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
29321094 29321094 PRJNA560932_P_NODE_66389_length_241_cov_0.916667_g66033_i0 PRJNA560932 66389 241 0.916667 2.20916747 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 50.1 9.21e-5   NR MFC1844185.1 2202153 g66033 i0 45 1.46887966804979 60 26 74.7 1 180 1 209 261 MFC1844185.1 DHHA2 domain-containing protein [Thermodesulfobacteriota bacterium] diamond 354 50.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29398217 29398217 PRJNA560932_P_NODE_40649_length_286_cov_1.056338_g40293_i0 PRJNA560932 40649 286 1.056338 3.02112668 Pseudomonadati 3379134 Bacteria Bacteria 68.6 4.38e-11   NR NPB09781.1 2202153 g40293 i0 44.7 13.6573426573427 85 45 89.2 1 276 22 240 322 NPB09781.1 3-dehydroquinate synthase [Thermodesulfobacteriota bacterium] diamond 3906 68.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
29524600 29524600 PRJNA560932_P_NODE_25450_length_353_cov_2.000000_g25094_i0 PRJNA560932 25450 353 2 7.06 Bacteria 2 Bacteria Bacteria 106 9.990000000000002e-27   NR MCP4022136.1 2049433 g25094 i0 46.2 5.96600566572238 117 61 99.4 1 353 3 25 139 MCP4022136.1 GNAT family N-acetyltransferase [Desulfobacteraceae bacterium] diamond 2106 107 0.990654205607477 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
29573524 29573524 PRJNA560932_P_NODE_54290_length_250_cov_0.870056_g53934_i0 PRJNA560932 54290 250 0.870056 2.17514 Thermodesulfobacterium sp. 1965289 Bacteria Bacteria 46.2 0.00208   NR MBO8144145.1 1965289 g53934 i0 38.2 0.66 55 29 60 1 174 25 99 153 MBO8144145.1 formate dehydrogenase accessory protein FdhE [Thermodesulfobacterium sp.] diamond 165 46.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Thermodesulfobacteria Thermodesulfobacteriales Thermodesulfobacteriaceae Thermodesulfobacterium Thermodesulfobacterium sp.
29604969 29604969 PRJNA560932_P_NODE_51130_length_253_cov_1.505556_g50774_i0 PRJNA560932 51130 253 1.505556 3.80905668 uncultured Desulfobacter sp. 240139 Bacteria Bacteria 46.2 0.00242   NR WP_394707176.1 240139 g50774 i0 31.8 2.01581027667984 85 53 97.2 3 3 248 51 133 WP_394707176.1 peptidoglycan DD-metalloendopeptidase family protein [uncultured Desulfobacter sp.] diamond 510 46.2 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae Desulfobacter uncultured Desulfobacter sp.
29650400 29650400 PRJNA560932_P_NODE_55030_length_249_cov_0.875000_g54674_i0 PRJNA560932 55030 249 0.875 2.17875 Pseudomonadati 3379134 Bacteria Bacteria 85.9 2.58e-17   NR WP_013705225.1 60893 g54674 i0 52.4 2.96385542168675 82 38 97.6 1 3 245 515 596 WP_013705225.1 CHASE2 domain-containing protein [Desulfobacca acetoxidans] diamond 738 86.7 0.990772779700115 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobaccia Desulfobaccales Desulfobaccaceae Desulfobacca Desulfobacca acetoxidans
29713595 29713595 PRJNA560932_P_NODE_51650_length_251_cov_2.595506_g51294_i0 PRJNA560932 51650 251 2.595506 6.51472006 Syntrophorhabdus 513557 Bacteria Bacteria 44.7 0.00824   NR WP_156919854.1 328301 g51294 i0 37.5 1.33864541832669 56 33 66.9 1 229 62 97 150 WP_156919854.1 hypothetical protein [Syntrophorhabdus aromaticivorans] diamond 336 44.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophorhabdia Syntrophorhabdales Syntrophorhabdaceae Syntrophorhabdus Syntrophorhabdus aromaticivorans
29794607 29794607 PRJNA560932_P_NODE_59391_length_246_cov_0.890173_g59035_i0 PRJNA560932 59391 246 0.890173 2.18982558 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 79.7 3.54e-15   NR MFC1834884.1 2202153 g59035 i0 44.2 0.939024390243902 77 43 93.9 0 6 236 143 219 MFC1834884.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 231 79.7 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
30205175 30205175 PRJNA560932_P_NODE_66612_length_241_cov_0.916667_g66256_i0 PRJNA560932 66612 241 0.916667 2.20916747 Desulfatitalea alkaliphila 2929485 Bacteria Bacteria 44.3 0.0106   NR WP_246910959.1 2929485 g66256 i0 39.7 0.846473029045643 68 25 64.7 2 190 35 82 149 WP_246910959.1 DUF2169 family type VI secretion system accessory protein [Desulfatitalea alkaliphila] diamond 204 44.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfosarcinaceae Desulfatitalea Desulfatitalea alkaliphila
30237009 30237009 PRJNA560932_P_NODE_35432_length_305_cov_1.568966_g35076_i0 PRJNA560932 35432 305 1.568966 4.7853463 Desulfatiglandales bacterium 3024416 Bacteria Bacteria 61.6 1.46e-8   NR MFO8165744.1 3024416 g35076 i0 54.2 9.03934426229508 48 22 47.2 0 232 89 155 202 MFO8165744.1 nucleotide sugar dehydrogenase [Desulfatiglandales bacterium] diamond 2757 61.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfatiglandales     Desulfatiglandales bacterium
30458589 30458589 PRJNA560932_P_NODE_46593_length_267_cov_4.567010_g46237_i0 PRJNA560932 46593 267 4.56701 12.1939167 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 48.5 2.1e-4   NR MDA8165832.1 2049433 g46237 i0 56.5 1.67415730337079 46 20 51.7 0 267 130 7 52 MDA8165832.1 SEC-C metal-binding domain-containing protein [Desulfobacteraceae bacterium] diamond 447 48.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
30710940 30710940 PRJNA560932_P_NODE_63494_length_243_cov_0.905882_g63138_i0 PRJNA560932 63494 243 0.905882 2.20129326 Geomonas diazotrophica 2843197 Bacteria Bacteria 72 1.91e-12   NR WP_216500250.1 2843197 g63138 i0 47.9 0.876543209876543 71 36 87.7 1 31 243 591 660 WP_216500250.1 putative Ig domain-containing protein [Geomonas diazotrophica] diamond 213 72 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geomonas Geomonas diazotrophica
30742505 30742505 PRJNA560932_P_NODE_34474_length_309_cov_1.741525_g34118_i0 PRJNA560932 34474 309 1.741525 5.38131225 Desulfobacterales bacterium 2044940 Bacteria Bacteria 48.5 7.64e-4   NR MCP4348966.1 2044940 g34118 i0 37.3 2.02912621359223 67 42 65 0 7 207 595 661 MCP4348966.1 response regulator [Desulfobacterales bacterium] diamond 627 48.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
31027087 31027087 PRJNA560932_P_NODE_60295_length_246_cov_0.861272_g59939_i0 PRJNA560932 60295 246 0.861272 2.11872912 Trichlorobacter lovleyi 313985 Bacteria Bacteria 67.8 4.2e-12   NR WP_281184906.1 313985 g59939 i0 51.7 1.52439024390244 58 28 70.7 0 29 202 76 133 WP_281184906.1 VOC family protein [Trichlorobacter lovleyi] diamond 375 67.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Trichlorobacter Trichlorobacter lovleyi
31248093 31248093 PRJNA560932_P_NODE_53115_length_250_cov_3.090395_g52759_i0 PRJNA560932 53115 250 3.090395 7.7259875 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 52.8 1.62e-6   NR MEE4604944.1 2049433 g52759 i0 40.5 2.844 79 41 91.2 2 9 236 28 103 MEE4604944.1 phenylpyruvate tautomerase MIF-related protein [Desulfobacteraceae bacterium] diamond 711 52.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
31279623 31279623 PRJNA560932_P_NODE_36175_length_302_cov_1.454148_g35819_i0 PRJNA560932 36175 302 1.454148 4.39152696 Desulfoglaeba alkanexedens 361111 Bacteria Bacteria 78.6 7.22e-17   NR WP_137425389.1 361111 g35819 i0 52.9 0.675496688741722 68 30 67.5 1 88 291 2 67 WP_137425389.1 cold-shock protein [Desulfoglaeba alkanexedens] diamond 204 78.6 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Syntrophobacteria Syntrophobacterales Syntrophobacteraceae Desulfoglaeba Desulfoglaeba alkanexedens
31388733 31388733 PRJNA560932_P_NODE_15436_length_446_cov_1.646113_g15081_i0 PRJNA560932 15436 446 1.646113 7.34166398 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 54.3 1.36e-5   NR HWP90937.1 2202153 g15081 i0 34.8 2.75784753363229 92 57 61.9 1 330 55 34 122 HWP90937.1 CAP domain-containing protein [Thermodesulfobacteriota bacterium] diamond 1230 54.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31848986 31848986 PRJNA560932_P_NODE_17097_length_425_cov_1.312500_g16741_i0 PRJNA560932 17097 425 1.3125 5.578125 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 142 2.49e-36   NR HAO22905.1 2049433 g16741 i0 44.6 0.981176470588235 139 77 98.1 0 419 3 402 540 HAO22905.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 417 142 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;