RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA560932" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA560932 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31406386 31406386 PRJNA560932_P_NODE_496_length_1768_cov_16.677286_g407_i0 PRJNA560932 496 1768 16.677286 294.85441648 Synergistaceae bacterium 2053624 Bacteria Bacteria 67 1.82e-7   NR MBR0034508.1 2053624 g407 i0 30.2 1.97171945701357 212 118 34.1 5 32 634 405 597 MBR0034508.1 putative Ig domain-containing protein [Synergistaceae bacterium] diamond 3486 67 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
31627620 31627620 PRJNA560932_P_NODE_656_length_1633_cov_12.641026_g549_i0 PRJNA560932 656 1633 12.641026 206.42795458 Synergistaceae bacterium 2053624 Bacteria Bacteria 76.6 1.83e-10   NR MBQ7221748.1 2053624 g549 i0 36.2 0.299448867115738 163 91 29.8 4 1617 1132 519 669 MBQ7221748.1 putative Ig domain-containing protein [Synergistaceae bacterium] diamond 489 76.6 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;