RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA560932" and tax_phylum = "Candidatus Roizmaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Roizmaniibacteriota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA560932 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4372265 4372265 PRJNA560932_P_NODE_56944_length_248_cov_0.880000_g56588_i0 PRJNA560932 56944 248 0.88 2.1824 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 143 3.349999999999999e-38   NR MFS8160018.1 2282149 g56588 i0 81.7 94.2338709677419 82 15 99.2 0 3 248 159 240 MFS8160018.1 ATP-binding protein [Candidatus Roizmanbacteria bacterium] diamond 23370 143 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
27584481 27584481 PRJNA560932_P_NODE_27444_length_342_cov_1.717472_g27088_i0 PRJNA560932 27444 342 1.717472 5.87375424 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 43.9 0.0166   NR MFS8160491.1 2282149 g27088 i0 32.9 0.666666666666667 76 50 65.8 1 321 97 26 101 MFS8160491.1 DUF4471 domain-containing protein [Candidatus Roizmanbacteria bacterium] diamond 228 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
27963455 27963455 PRJNA560932_P_NODE_61305_length_245_cov_0.895349_g60949_i0 PRJNA560932 61305 245 0.895349 2.19360505 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 76.3 7.43e-16   NR MFS8159651.1 2282149 g60949 i0 46.1 0.930612244897959 76 41 93.1 0 244 17 15 90 MFS8159651.1 C2 domain-containing protein [Candidatus Roizmanbacteria bacterium] diamond 228 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
28658177 28658177 PRJNA560932_P_NODE_34907_length_307_cov_1.974359_g34551_i0 PRJNA560932 34907 307 1.974359 6.06128213 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 54.7 4.65e-6   NR MFS8160610.1 2282149 g34551 i0 39.8 0.957654723127036 98 58 95.8 1 14 307 174 270 MFS8160610.1 hypothetical protein [Candidatus Roizmanbacteria bacterium] diamond 294 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
28721322 28721322 PRJNA560932_P_NODE_60467_length_245_cov_1.418605_g60111_i0 PRJNA560932 60467 245 1.418605 3.47558225 Candidatus Roizmanbacteria bacterium CG2_3 2282149 Bacteria Bacteria 70.9 4.47e-12   NR OIP83521.1 1805340 g60111 i0 40.3 1.76326530612245 77 46 94.3 0 12 242 23 99 OIP83521.1 MAG: hypothetical protein AUK04_03335, partial [Candidatus Roizmanbacteria bacterium CG2_30_33_16] diamond 432 70.9 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium CG2_30_33_16
29257699 29257699 PRJNA560932_P_NODE_17489_length_420_cov_6.827089_g17133_i0 PRJNA560932 17489 420 6.827089 28.6737738 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 192 3.17e-60   NR MFS8160617.1 2282149 g17133 i0 75 11.7571428571429 136 32 97.1 1 3 410 2 135 MFS8160617.1 histone H3 [Candidatus Roizmanbacteria bacterium] diamond 4938 192 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;