RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA560932" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA560932 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28973961 28973961 PRJNA560932_P_NODE_47708_length_264_cov_1.460733_g47352_i0 PRJNA560932 47708 264 1.460733 3.85633512 Omnitrophica WOR_2 bacterium SM23_29 1703776 Bacteria Bacteria 68.9 1.45e-11   NR KPK42724.1 1703776 g47352 i0 35.3 0.965909090909091 85 55 96.6 0 5 259 181 265 KPK42724.1 MAG: hypothetical protein AMJ78_01475 [Omnitrophica WOR_2 bacterium SM23_29] diamond 255 68.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica WOR_2 bacterium SM23_29
29524605 29524605 PRJNA560932_P_NODE_34790_length_308_cov_1.306383_g34434_i0 PRJNA560932 34790 308 1.306383 4.02365964 Pseudomonadati 3379134 Bacteria Bacteria 85.1 3.43e-17   NR MDD4980898.1 2035772 g34434 i0 41.2 5.88311688311688 102 60 99.4 0 306 1 159 260 MDD4980898.1 ACP S-malonyltransferase [Candidatus Omnitrophota bacterium] diamond 1812 85.9 0.990686845168801 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30503803 30503803 PRJNA560932_P_NODE_57513_length_247_cov_1.770115_g57157_i0 PRJNA560932 57513 247 1.770115 4.37218405 Bacteria 2 Bacteria Bacteria 42.7 0.0395   NR OGX31181.1 1801855 g57157 i0 35.9 1.89473684210526 78 42 93.5 3 14 244 154 224 OGX31181.1 MAG: molecular chaperone DnaK [Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_46_37] diamond 468 43.1 0.990719257540603 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_46_37
32228940 32228940 PRJNA560932_P_NODE_48318_length_262_cov_1.582011_g47962_i0 PRJNA560932 48318 262 1.582011 4.14486882 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 90.9 1.6400000000000002e-21   NR MBF0385486.1 2035772 g47962 i0 54.1 1.8206106870229 74 34 84.7 0 38 259 4 77 MBF0385486.1 divalent-cation tolerance protein CutA [Candidatus Omnitrophota bacterium] diamond 477 90.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;