RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where bioproject = "PRJNA560932", tax_phylum = "Candidatus Micrarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 5 ✖

tax_phylum 1

  • Candidatus Micrarchaeota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA560932 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15847474 15847474 PRJNA560932_P_NODE_32173_length_319_cov_1.467480_g31817_i0 PRJNA560932 32173 319 1.46748 4.6812612 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 136 6.16e-38   NR MBU1165780.1 2250274 g31817 i0 65.6 3.58307210031348 96 33 90.3 0 319 32 107 202 MBU1165780.1 ATPase [Candidatus Micrarchaeota archaeon] diamond 1143 136 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
26635800 26635800 PRJNA560932_P_NODE_58161_length_247_cov_0.885057_g57805_i0 PRJNA560932 58161 247 0.885057 2.18609079 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 43.9 0.0158   NR MFH0971831.1 2250274 g57805 i0 43.1 2.04048582995951 58 29 69.2 2 243 73 395 449 MFH0971831.1 toxin TcdB middle/N-terminal domain-containing protein [Candidatus Micrarchaeota archaeon] diamond 504 43.9 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
27237050 27237050 PRJNA560932_P_NODE_5743_length_716_cov_4.032659_g5406_i0 PRJNA560932 5743 716 4.032659 28.87383844 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 73.6 5.41e-11   NR MEW6035654.1 2250274 g5406 i0 42.7 0.754189944134078 89 47 36.9 3 349 612 106 191 MEW6035654.1 hypothetical protein [Candidatus Micrarchaeota archaeon] diamond 540 73.6 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
28924461 28924461 PRJNA560932_P_NODE_55068_length_249_cov_0.875000_g54712_i0 PRJNA560932 55068 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 48.5 3.7e-4   NR MFH0954693.1 2250274 g54712 i0 50 2.19277108433735 48 22 57.8 1 14 157 100 145 MFH0954693.1 LamG-like jellyroll fold domain-containing protein [Candidatus Micrarchaeota archaeon] diamond 546 48.5 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
29257702 29257702 PRJNA560932_P_NODE_19149_length_402_cov_1.726444_g18793_i0 PRJNA560932 19149 402 1.726444 6.94030488 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 79.7 7.13e-15   NR MBD3210577.1 2250274 g18793 i0 40 0.783582089552239 105 58 76.9 4 81 389 81 182 MBD3210577.1 hypothetical protein [Candidatus Micrarchaeota archaeon] diamond 315 79.7 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;