RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA560932" and tax_phylum = "Candidatus Kapaibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA560932 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
544703 544703 PRJNA560932_P_NODE_45001_length_272_cov_2.085427_g44645_i0 PRJNA560932 45001 272 2.085427 5.67236144 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 340 4.759999999999999e-89   NTclustered gi|2518551211|emb|OX638338.1| 2447898 g44645 i0 92.469 169.183823529412 239 17 88 1 4 241 2780548 2780310 MAG: Candidatus Kapabacteria bacterium isolate 9634bca7-0036-4470-acfa-8c32e30c46ef genome assembly, chromosome: 1 blastn 46018 340 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29415715 29415715 PRJNA560932_P_NODE_28109_length_338_cov_14.788679_g27753_i0 PRJNA560932 28109 338 14.788679 49.98573502 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 42.7 0.0308   NR MCU0428129.1 2447898 g27753 i0 30.8 0.807692307692308 91 58 79 3 11 277 1 88 MCU0428129.1 type II toxin-antitoxin system PemK/MazF family toxin [Candidatus Kapaibacterium sp.] diamond 273 42.7 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31388737 31388737 PRJNA560932_P_NODE_28896_length_334_cov_1.835249_g28540_i0 PRJNA560932 28896 334 1.835249 6.12973166 Pseudomonadati 3379134 Bacteria Bacteria 79.3 7.25e-15   NR HVK57961.1 2447898 g28540 i0 39.2 6.68263473053892 102 60 89.8 1 312 13 173 274 HVK57961.1 alkaline phosphatase [Candidatus Kapaibacterium sp.] diamond 2232 79.7 0.994981179422836 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;