RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA560932", tax_kingdom = "Promethearchaeati" and tax_phylum = "Promethearchaeota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

  • Promethearchaeati · 2 ✖

bioproject 1

  • PRJNA560932 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22221626 22221626 PRJNA560932_P_NODE_21598_length_380_cov_1.368078_g21242_i0 PRJNA560932 21598 380 1.368078 5.1986964 Candidatus Lokiarchaeum ossiferum 2951803 Archaea Archaea 56.5 0.003   NTclustered gi|2321196112|gb|CP104013.1| 2951803 g21242 i0 100 0.0789473684210526 30 0 8 0 19 48 5843216 5843245 Candidatus Lokiarchaeum ossiferum isolate Loki-B35 chromosome, complete genome blastn 30 56.5 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia Promethearchaeales Promethearchaeaceae Candidatus Lokiarchaeum Candidatus Lokiarchaeum ossiferum
30914619 30914619 PRJNA560932_P_NODE_23134_length_369_cov_1.000000_g22778_i0 PRJNA560932 23134 369 1 3.69 Promethearchaeati 1935183 Archaea Archaea 52.8 4.64e-5   NR MBD3157852.1 2053489 g22778 i0 26.8 2.95934959349594 127 77 91.1 5 18 353 462 587 MBD3157852.1 hypothetical protein [Promethearchaeota archaeon] diamond 1092 52.8 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;