contig_metadata
4 rows where bioproject = "PRJNA560932", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29794608 | 29794608 | PRJNA560932_P_NODE_59851_length_246_cov_0.890173_g59495_i0 | PRJNA560932 | 59851 | 246 | 0.890173 | 2.18982558 | Candidatus Saccharimonadales bacterium | 2973664 | Bacteria | Bacteria | 73.6 | 5.27e-13 | NR | HEX7484049.1 | 2973664 | g59495 | i0 | 95 | 0.951219512195122 | 40 | 1 | 47.6 | 1 | 245 | 129 | 283 | 322 | HEX7484049.1 aspartate--tRNA ligase [Candidatus Saccharimonadales bacterium] | diamond | 234 | 73.6 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadales bacterium | ||||
| 29826147 | 29826147 | PRJNA560932_P_NODE_21711_length_379_cov_1.617647_g21355_i0 | PRJNA560932 | 21711 | 379 | 1.617647 | 6.13088213 | Candidatus Saccharimonadales bacterium | 2973664 | Bacteria | Bacteria | 124 | 4.899999999999999e-31 | NR | HTC64172.1 | 2973664 | g21355 | i0 | 50.8 | 7.45646437994723 | 118 | 58 | 93.4 | 0 | 376 | 23 | 235 | 352 | HTC64172.1 MFS transporter [Candidatus Saccharimonadales bacterium] | diamond | 2826 | 124 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadales bacterium | ||||
| 30427022 | 30427022 | PRJNA560932_P_NODE_4733_length_787_cov_1.508403_g4413_i0 | PRJNA560932 | 4733 | 787 | 1.508403 | 11.87113161 | Candidatus Saccharimonadaceae bacterium | 2830836 | Bacteria | Bacteria | 159 | 1.92e-44 | NR | HTK30753.1 | 2830836 | g4413 | i0 | 43.4 | 4.17789072426938 | 219 | 107 | 83.1 | 4 | 98 | 751 | 4 | 206 | HTK30753.1 aquaporin [Candidatus Saccharimonadaceae bacterium] | diamond | 3288 | 159 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Saccharimonadales | Candidatus Saccharimonadaceae | Candidatus Saccharimonadaceae bacterium | |||
| 32496031 | 32496031 | PRJNA560932_P_NODE_58979_length_246_cov_1.768786_g58623_i0 | PRJNA560932 | 58979 | 246 | 1.768786 | 4.35121356 | Bacteria | 2 | Bacteria | Bacteria | 60.8 | 1.54e-8 | NR | MDB5180430.1 | 2026720 | g58623 | i0 | 41.8 | 1.92682926829268 | 79 | 46 | 96.3 | 0 | 8 | 244 | 234 | 312 | MDB5180430.1 hypothetical protein [Candidatus Saccharibacteria bacterium] | diamond | 474 | 60.8 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;