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contig_metadata

4 rows where bioproject = "PRJNA560932", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA560932 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26699009 26699009 PRJNA560932_P_NODE_43261_length_278_cov_1.126829_g42905_i0 PRJNA560932 43261 278 1.126829 3.13258462 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 49.7 1.21e-4   NR MBI3988794.1 2072417 g42905 i0 32.6 0.992805755395683 92 56 92.8 1 275 18 66 157 MBI3988794.1 tetratricopeptide repeat protein [Candidatus Methylomirabilota bacterium] diamond 276 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28103551 28103551 PRJNA560932_P_NODE_67845_length_231_cov_2.341772_g67489_i0 PRJNA560932 67845 231 2.341772 5.40949332 Pseudomonadati 3379134 Bacteria Bacteria 47.4 7.24e-4   NR HKQ64985.1 2072417 g67489 i0 47.7 3.38961038961039 65 33 83.1 1 220 29 299 363 HKQ64985.1 ankyrin repeat domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 783 47.8 0.99163179916318 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
31943832 31943832 PRJNA560932_P_NODE_60497_length_245_cov_1.343023_g60141_i0 PRJNA560932 60497 245 1.343023 3.29040635 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 42.7 0.0268   NR HEY7652206.1 2072417 g60141 i0 36.2 0.844897959183673 69 42 84.5 1 232 26 96 162 HEY7652206.1 AMP-binding protein [Candidatus Methylomirabilota bacterium] diamond 207 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
32197189 32197189 PRJNA560932_P_NODE_48298_length_262_cov_1.629630_g47942_i0 PRJNA560932 48298 262 1.62963 4.2696306 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 50.4 3.92e-6   NR HET7874251.1 2072417 g47942 i0 47.6 2.07251908396947 42 22 48.1 0 255 130 9 50 HET7874251.1 YqgE/AlgH family protein [Candidatus Methylomirabilota bacterium] diamond 543 50.4 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;