RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA560932", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA560932 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28658220 28658220 PRJNA560932_P_NODE_67067_length_241_cov_0.916667_g66711_i0 PRJNA560932 67067 241 0.916667 2.20916747 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 43.9 0.0137   NR MCK4890567.1 2052149 g66711 i0 39.4 3.28630705394191 66 40 82.2 0 33 230 24 89 MCK4890567.1 tetratricopeptide repeat protein [Candidatus Aminicenantes bacterium] diamond 792 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
31184587 31184587 PRJNA560932_P_NODE_39815_length_288_cov_2.148837_g39459_i0 PRJNA560932 39815 288 2.148837 6.18865056 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 44.3 0.011   NR MBN1939323.1 2052149 g39459 i0 31.3 1.73958333333333 83 47 80.2 3 248 18 1 79 MBN1939323.1 lipocalin family protein [Candidatus Aminicenantes bacterium] diamond 501 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
31279604 31279604 PRJNA560932_P_NODE_23395_length_367_cov_1.047619_g23039_i0 PRJNA560932 23395 367 1.047619 3.84476173 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 44.3 0.0265   NR MCK4645782.1 2052149 g23039 i0 34 0.433242506811989 53 35 43.3 0 222 64 24 76 MCK4645782.1 transposase [Candidatus Aminicenantes bacterium] diamond 159 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;