RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA560029" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA560029 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1819780 1819780 PRJNA560029_S_NODE_31862_length_251_cov_3.735955_g31638_i0 PRJNA560029 31862 251 3.735955 9.37724705 Hirudo verbana 311461 Annelida Annelida 52.8 0.023   NTclustered gi|2918369613|emb|OZ237779.1| 311461 g31638 i0 100 0.111553784860558 28 0 11 0 123 150 5858307 5858280 Hirudo verbana genome assembly, chromosome: 1 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
14572793 14572793 PRJNA560029_S_NODE_2172_length_576_cov_5.793241_g1954_i0 PRJNA560029 2172 576 5.793241 33.36906816 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 234 2.19e-75   NR WRM33302.1 6396 g1954 i0 77.2 52.8645833333333 145 33 75.5 0 574 140 37 181 WRM33302.1 60S ribosomal protein L11 [Eisenia fetida] diamond 30450 234 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Lumbricidae Eisenia Eisenia fetida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;