RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA560029", tax_kingdom = "Metazoa" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA560029 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
544220 544220 PRJNA560029_S_NODE_7321_length_396_cov_3.021672_g7097_i0 PRJNA560029 7321 396 3.021672 11.96582112 Adineta steineri 433720 Rotifera other_Eukaryota 97.1 3.49e-23   NR CAF0862354.1 433720 g7097 i0 54 2.63636363636364 87 40 65.9 0 101 361 22 108 CAF0862354.1 unnamed protein product [Adineta steineri] diamond 1044 97.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
31152820 31152820 PRJNA560029_S_NODE_10855_length_360_cov_1.404181_g10631_i0 PRJNA560029 10855 360 1.404181 5.0550516 Adineta steineri 433720 Rotifera other_Eukaryota 44.3 0.0384   NR CAF1524545.1 433720 g10631 i0 46.3 0.666666666666667 41 22 34.2 0 200 322 177 217 CAF1524545.1 unnamed protein product [Adineta steineri] diamond 240 44.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;