RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA560029", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA560029 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28040611 28040611 PRJNA560029_S_NODE_21025_length_298_cov_1.253333_g20801_i0 PRJNA560029 21025 298 1.253333 3.73493234 Taeniidae 6208 Platyhelminthes Platyhelminthes 119 5.1e-30   NR VDM23323.1 6205 g20801 i0 65.3 18.7046979865772 98 21 88.6 2 266 3 1 95 VDM23323.1 unnamed protein product [Hydatigera taeniaeformis] diamond 5574 120 0.991666666666667 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Hydatigera Hydatigera taeniaeformis
28721236 28721236 PRJNA560029_S_NODE_28307_length_265_cov_3.276042_g28083_i0 PRJNA560029 28307 265 3.276042 8.6815113 Hymenolepis diminuta 6216 Platyhelminthes Platyhelminthes 45.8 0.00396   NR VDL25004.1 6216 g28083 i0 60 1.91320754716981 40 15 45.3 1 264 145 463 501 VDL25004.1 unnamed protein product [Hymenolepis diminuta] diamond 507 45.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;