RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA560029", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA560029 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26776683 26776683 PRJNA560029_S_NODE_5681_length_421_cov_7.502874_g5457_i0 PRJNA560029 5681 421 7.502874 31.58709954 Fungi 4751 Fungi Fungi 132 1.31e-36   NR KAI9217172.1 64508 g5457 i0 49.2 7.10451306413302 126 64 89.8 0 8 385 13 138 KAI9217172.1 hypothetical protein BC828DRAFT_391853 [Blastocladiella britannica] diamond 2991 133 0.992481203007519 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
31564600 31564600 PRJNA560029_S_NODE_22816_length_289_cov_3.648148_g22592_i0 PRJNA560029 22816 289 3.648148 10.54314772 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 65.9 3.23e-10   NR KAI9179977.1 1313167 g22592 i0 63.5 1.07958477508651 52 16 54 1 287 132 255 303 KAI9179977.1 Arp complex subunit [Blastocladiella emersonii ATCC 22665] diamond 312 65.9 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;