RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA560029", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA560029 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27409267 27409267 PRJNA560029_S_NODE_9043_length_376_cov_2.495050_g8819_i0 PRJNA560029 9043 376 2.49505 9.381388 Eukaryota 2759 Fungi Fungi 100 6.619999999999999e-23   NR ORZ03566.1 13706 g8819 i0 47.1 6.4468085106383 102 46 81.4 1 3 308 198 291 ORZ03566.1 protein serine/threonine kinase [Syncephalastrum racemosum] diamond 2424 100 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Syncephalastraceae Syncephalastrum Syncephalastrum racemosum
27521281 27521281 PRJNA560029_S_NODE_5023_length_435_cov_2.900552_g4799_i0 PRJNA560029 5023 435 2.900552 12.6174012 Dichotomocladium elegans 101130 Fungi Fungi 52.4 1.2e-4   NR KAI9318190.1 101130 g4799 i0 36.7 1.02758620689655 79 46 51.7 2 424 200 582 660 KAI9318190.1 hypothetical protein BX666DRAFT_2026598 [Dichotomocladium elegans] diamond 447 52.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Dichotomocladium Dichotomocladium elegans
32116283 32116283 PRJNA560029_S_NODE_23078_length_288_cov_2.404651_g22854_i0 PRJNA560029 23078 288 2.404651 6.92539488 Opisthokonta 33154 Fungi Fungi 73.6 1.6e-14   NR RCH87612.1 4846 g22854 i0 58.3 8.1875 60 22 60.4 2 3 176 49 107 RCH87612.1 ribosomal 40S subunit protein S27A, partial [Rhizopus stolonifer] diamond 2358 73.9 0.995940460081191 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;