RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA560029", tax_clade = "FCB group" and tax_phylum = "Candidatus Zixiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Zixiibacteriota · 1 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 1 ✖

bioproject 1

  • PRJNA560029 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30584309 30584309 PRJNA560029_S_NODE_21573_length_295_cov_2.283784_g21349_i0 PRJNA560029 21573 295 2.283784 6.7371628 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 89.7 1.2e-20   NR UCB52643.1 2053527 g21349 i0 52.9 2.66440677966102 87 39 88.5 1 7 267 38 122 UCB52643.1 MAG: nitroreductase family protein, partial [Candidatus Zixiibacteriota bacterium] diamond 786 89.7 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;