RNAquarium Metadata Server
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contig_metadata

18 rows where bioproject = "PRJNA559720" and tax_phylum = "Placozoa"

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tax_superkingdom 1

tax_phylum 1

  • Placozoa · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA559720 · 18 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26871852 26871852 PRJNA559720_P_NODE_12761_length_261_cov_3.111702_g12622_i0 PRJNA559720 12761 261 3.111702 8.12154222 Metazoa 33208 Placozoa other_Eukaryota 80.5 1.78e-15   NR XP_002113673.1 10228 g12622 i0 54.5 4.35632183908046 66 30 75.9 0 198 1 131 196 XP_002113673.1 uncharacterized protein TRIADDRAFT_26628 [Trichoplax adhaerens] diamond 1137 80.9 0.995055624227441 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
26920787 26920787 PRJNA559720_P_NODE_5422_length_444_cov_1.231806_g5283_i0 PRJNA559720 5422 444 1.231806 5.46921864 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 187 3.03e-53   NR XP_002108960.1 10228 g5283 i0 67.2 3.31756756756757 116 38 78.4 0 93 440 480 595 XP_002108960.1 uncharacterized protein TRIADDRAFT_52481 [Trichoplax adhaerens] diamond 1473 187 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
26997883 26997883 PRJNA559720_P_NODE_2442_length_651_cov_2.207612_g2324_i0 PRJNA559720 2442 651 2.207612 14.37155412 Metazoa 33208 Placozoa other_Eukaryota 280 1.02e-92   NR XP_002109400.1 10228 g2324 i0 64.1 59.5115207373272 195 65 87.6 1 586 17 2 196 XP_002109400.1 protein kinase Ck2-beta, partial [Trichoplax adhaerens] diamond 38742 281 0.99644128113879 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
26997884 26997884 PRJNA559720_P_NODE_4882_length_469_cov_3.419192_g4744_i0 PRJNA559720 4882 469 3.419192 16.03601048 Metazoa 33208 Placozoa other_Eukaryota 165 2e-49   NR XP_002111299.1 10228 g4744 i0 61.8 26.0277185501066 123 47 78.7 0 64 432 4 126 XP_002111299.1 expressed hypothetical protein [Trichoplax adhaerens] diamond 12207 165 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
27472296 27472296 PRJNA559720_P_NODE_5543_length_439_cov_1.792350_g5404_i0 PRJNA559720 5543 439 1.79235 7.8684165 Metazoa 33208 Placozoa other_Eukaryota 65.9 1.95e-9   NR XP_002108054.1 10228 g5404 i0 41 4.10706150341686 83 49 56.7 0 186 434 183 265 XP_002108054.1 uncharacterized protein TRIADDRAFT_20152 [Trichoplax adhaerens] diamond 1803 66.2 0.995468277945619 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
27742665 27742665 PRJNA559720_P_NODE_304_length_1358_cov_3.496498_g274_i0 PRJNA559720 304 1358 3.496498 47.48244284 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 563 2.1499999999999994e-194   NR XP_002113591.1 10228 g274 i0 62.4 31.000736377025 452 162 99.9 2 2 1357 107 550 XP_002113591.1 expressed hypothetical protein [Trichoplax adhaerens] diamond 42099 563 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
28215725 28215725 PRJNA559720_P_NODE_5446_length_443_cov_1.348649_g5307_i0 PRJNA559720 5446 443 1.348649 5.97451507 Trichoplax sp. H2 287889 Placozoa other_Eukaryota 181 1.3299999999999995e-55   NR RDD46168.1 287889 g5307 i0 55.6 2.88487584650113 142 60 94.1 1 1 417 11 152 RDD46168.1 putative ubiquitin-conjugating enzyme E2 W-A [Trichoplax sp. H2] diamond 1278 181 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax sp. H2
28451153 28451153 PRJNA559720_P_NODE_7286_length_375_cov_1.917219_g7147_i0 PRJNA559720 7286 375 1.917219 7.18957125 Metazoa 33208 Placozoa other_Eukaryota 162 3.72e-46   NR XP_002110768.1 10228 g7147 i0 67.6 3.6 111 36 88.8 0 41 373 46 156 XP_002110768.1 uncharacterized protein TRIADDRAFT_54013 [Trichoplax adhaerens] diamond 1350 162 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
29131753 29131753 PRJNA559720_P_NODE_3569_length_548_cov_1.821053_g3441_i0 PRJNA559720 3569 548 1.821053 9.97937044 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 121 3.0899999999999998e-28   NR XP_002117163.1 10228 g3441 i0 78.6 13.9489051094891 182 38 99.6 1 546 1 318 498 XP_002117163.1 uncharacterized protein TRIADDRAFT_51004 [Trichoplax adhaerens] diamond 7644 121 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
29447127 29447127 PRJNA559720_P_NODE_3450_length_558_cov_1.769072_g3323_i0 PRJNA559720 3450 558 1.769072 9.87142176 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 180 1.02e-48   NR XP_002114338.1 10228 g3323 i0 54.6 0.876344086021505 163 71 87.6 1 9 497 1559 1718 XP_002114338.1 uncharacterized protein TRIADDRAFT_27970 [Trichoplax adhaerens] diamond 489 180 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
29604882 29604882 PRJNA559720_P_NODE_6010_length_419_cov_2.121387_g5871_i0 PRJNA559720 6010 419 2.121387 8.88861153 Placozoa sp. H4 1034858 Placozoa other_Eukaryota 110 2.28e-27   NR AGH70142.1 1034858 g5871 i0 48 0.909307875894988 127 62 90.9 2 393 13 3 125 AGH70142.1 eukaryotic translation elongation factor 1 gamma, partial [Placozoa sp. H4] diamond 381 110 1 Eukaryota Opisthokonta Metazoa Placozoa         Placozoa sp. H4
29636416 29636416 PRJNA559720_P_NODE_5810_length_427_cov_1.957627_g5671_i0 PRJNA559720 5810 427 1.957627 8.35906729 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 120 1.35e-28   NR XP_002108910.1 10228 g5671 i0 47.9 1.01170960187354 144 72 99.8 2 1 426 140 282 XP_002108910.1 uncharacterized protein TRIADDRAFT_12520, partial [Trichoplax adhaerens] diamond 432 120 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
29731253 29731253 PRJNA559720_P_NODE_7410_length_372_cov_1.478261_g7271_i0 PRJNA559720 7410 372 1.478261 5.49913092 Trichoplax sp. H2 287889 Placozoa other_Eukaryota 56.2 1.62e-7   NR RDD46310.1 287889 g7271 i0 49.3 0.911290322580645 69 27 55.6 2 65 271 28 88 RDD46310.1 cAMP-regulated phosphoprotein 19 [Trichoplax sp. H2] diamond 339 56.2 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax sp. H2
29984217 29984217 PRJNA559720_P_NODE_3491_length_554_cov_1.752599_g3363_i0 PRJNA559720 3491 554 1.752599 9.70939846 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 140 6.1e-38   NR XP_002115236.1 10228 g3363 i0 43.9 0.925992779783393 171 96 92.6 0 2 514 39 209 XP_002115236.1 uncharacterized protein TRIADDRAFT_28979 [Trichoplax adhaerens] diamond 513 140 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
30851228 30851228 PRJNA559720_P_NODE_3474_length_555_cov_8.315353_g3346_i0 PRJNA559720 3474 555 8.315353 46.15020915 Metazoa 33208 Placozoa other_Eukaryota 172 2.53e-51   NR XP_002108521.1 10228 g3346 i0 51 4.81081081081081 151 74 81.6 0 12 464 1 151 XP_002108521.1 uncharacterized protein TRIADDRAFT_19187 [Trichoplax adhaerens] diamond 2670 172 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
30995277 30995277 PRJNA559720_P_NODE_5954_length_422_cov_1.318052_g5815_i0 PRJNA559720 5954 422 1.318052 5.56217944 Trichoplax sp. H2 287889 Placozoa other_Eukaryota 134 9.99e-36   NR RDD47564.1 287889 g5815 i0 49.6 1.75592417061611 123 61 87.4 1 7 375 169 290 RDD47564.1 Ribosome biogenesis protein BRX1-like protein [Trichoplax sp. H2] diamond 741 134 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax sp. H2
31230260 31230260 PRJNA559720_P_NODE_1855_length_736_cov_1.788839_g1747_i0 PRJNA559720 1855 736 1.788839 13.16585504 Metazoa 33208 Placozoa other_Eukaryota 107 2.08e-22   NR XP_002114918.1 10228 g1747 i0 42.5 16.9279891304348 127 71 51 1 403 29 1451 1577 XP_002114918.1 uncharacterized protein TRIADDRAFT_10137, partial [Trichoplax adhaerens] diamond 12459 107 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
31230261 31230261 PRJNA559720_P_NODE_3395_length_562_cov_2.157464_g3269_i0 PRJNA559720 3395 562 2.157464 12.12494768 Metazoa 33208 Placozoa other_Eukaryota 189 4.0799999999999994e-57   NR XP_002109991.1 10228 g3269 i0 49.2 1.99110320284698 185 94 98.8 0 558 4 7 191 XP_002109991.1 uncharacterized protein TRIADDRAFT_20955 [Trichoplax adhaerens] diamond 1119 189 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;