RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA559720", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA559720 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27584436 27584436 PRJNA559720_P_NODE_1684_length_768_cov_2.746763_g1579_i0 PRJNA559720 1684 768 2.746763 21.09513984 Liverwort associated bunyavirus 4 2933082 Viruses Viruses 50.8 0.00406   NR CAI5383880.1 2933082 g1579 i0 30.4 0.48828125 125 78 47.7 2 369 4 179 297 CAI5383880.1 RNA-dependent RNA polymerase, partial [Liverwort associated bunyavirus 4] diamond 375 50.8 1 Viruses   Orthornavirae Negarnaviricota Ellioviricetes Bunyavirales     Liverwort associated bunyavirus 4
28815565 28815565 PRJNA559720_P_NODE_13908_length_250_cov_0.870056_g13769_i0 PRJNA559720 13908 250 0.870056 2.17514 Aulacomnium heterostichum bunyavirus 1 2933070 Viruses Viruses 57.4 2.94e-7   NR CAI5383856.1 2933070 g13769 i0 43.1 1.788 72 38 84 2 247 38 1560 1630 CAI5383856.1 RNA-dependent RNA polymerase [Aulacomnium heterostichum bunyavirus 1] diamond 447 57.4 1 Viruses   Orthornavirae Negarnaviricota Ellioviricetes Bunyavirales     Aulacomnium heterostichum bunyavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;