RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA559720" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA559720 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28815561 28815561 PRJNA559720_P_NODE_10908_length_291_cov_0.967890_g10769_i0 PRJNA559720 10908 291 0.96789 2.8165599 Burswood narna-like virus 3118308 Viruses Viruses 75.5 2.05e-13   NR WVL03117.1 3118308 g10769 i0 44.8 0.989690721649485 96 42 99 1 2 289 606 690 WVL03117.1 RdRp [Burswood narna-like virus] diamond 288 75.5 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Burswood narna-like virus
30363743 30363743 PRJNA559720_P_NODE_8832_length_334_cov_0.885057_g8693_i0 PRJNA559720 8832 334 0.885057 2.95609038 Neofusicoccum parvum narnavirus 1 2587532 Viruses Viruses 59.7 1.19e-7   NR WAK75278.1 2587532 g8693 i0 36 1.79640718562874 100 61 89.8 1 29 328 2 98 WAK75278.1 MAG: RNA-dependent RNA polymerase, partial [Neofusicoccum parvum narnavirus 1] diamond 600 59.7 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Neofusicoccum parvum narnavirus 1
30647415 30647415 PRJNA559720_P_NODE_2893_length_605_cov_1.563910_g2771_i0 PRJNA559720 2893 605 1.56391 9.4616555000000009 Ustilaginoidea virens narna-like virus 3 2972018 Viruses Viruses 69.3 7.97e-10   NR UVX28911.1 2972018 g2771 i0 32.3 0.813223140495868 164 92 74.4 6 2 451 839 997 UVX28911.1 MAG: RNA dependent RNA polymerase [Ustilaginoidea virens narna-like virus 3] diamond 492 69.3 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Ustilaginoidea virens narna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;